Zymomonas mobilis subsp. mobilis ATCC 29191: ZZ6_0223
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Entry
ZZ6_0223 CDS
T02187
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
zmb
Zymomonas mobilis subsp. mobilis ATCC 29191
Brite
KEGG Orthology (KO) [BR:
zmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmb03400
]
ZZ6_0223
Enzymes [BR:
zmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ZZ6_0223
DNA repair and recombination proteins [BR:
zmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ZZ6_0223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
NPHP3_N
DEAD
DUF2800
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFN56127
LinkDB
All DBs
Position
254760..258245
Genome browser
AA seq
1161 aa
AA seq
DB search
MAHPQRLMPLEAEQLQASDPKANIWLSASAGTGKTHVLTARVLRLLLNHAAPESILCLTF
TKAGAAEMSERINQRLAKWVIQLNDDELREELQALGARYDRDTLALARTLFARVLDAPGG
LRIQTIHSFCQSLLTAFPVEAGLIPGFRLIEGRDESTEAKKTLTRLLDHQTPPYHIKDDD
IALLAETLGEQGAEEYIYQCRFHAFALNNLGVAIESRVKRALDLPFLDINQALEEACDDD
HFDFALLRQIAEANEKWNTVTGKDTIKTIDLFVAAPPSGRVKLLENLLLVPCTKGGEPRS
IRAGLSKIAPEYKEWMIALEKAIYQIISLKKRHEFSKFVIAALRTGQAYSQAWQQTKKES
GLVDFNDMIETSVALLRTPGIGEWVRYKLDRTTDHILVDEAQDTNILQWAIISALAEDFF
SGESAKSVEASRSIFAVGDFKQAIYGFQGTDPQAFVDARDYFNDKSQGSGWEILDLSLNR
SFRSTPAILAMVDQMLADIESSGGGIGISQQALQPHQSARSDLGGSVVLWQPISDYQEEG
ENTSEEANIDDEEQLENGELELAIRLARQIDAWLNPKTPLYLPALGRNVEARDILILVRN
RGRLASLIVGCLHAQKIPVAGLDRLTLTAPLAVSDLLSAIRFVLQPDDDLTLACLLVSPL
IGWDQDRLYRLAAKRAKKESLFDRLRKSEAEKETWDIMREWLSKADFITPYRFLEMLLSG
KGDGRRKLLERLGEEARDPINELLNAALLLESETTPSFQRFLDWFDSGEVEIKRDPSVRQ
NTVRIMTVHGAKGLQAPVVILADATRDPHQSNGFRKEIITWPLDEANAPIPMPRNDDIAY
LPSDFGDIINEKKAKDLQEHWRLLYVAATRAEEYLVITGHLGSRAKNIPPKDSWYACATR
AITAMGIAWQEDTMWQQKAVYHWEGRKKVTDIPKKQPALPKDAMPSWIKNEIPEEPKPAY
PLRPSDLVKDNTPNPPPDGGSITAAKRGTLLHALFERLPMLPVEEREKAGLRWLETSAGV
KDAALQNSLIKDACDAMNNPVYRDIFSEKALAEAPIAAKVGEHVISGTVDRLWIDRDKKR
VHIVDFKTGRRVPATKEQVSEAYQRQLAAYIVALEKIFPNYAIEASLLYTTAPKLVSFDQ
SFMHDYFIQMDKGDIQSENQI
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggctcatccacagcgattaatgcctttggaggcagaacagcttcaggcatccgatcct
aaggcgaatatatggctgtcggcttctgctggaacggggaaaacgcatgttctgaccgca
cgggttctccggcttcttttaaatcatgcagcaccagaaagcatcctttgcctgaccttc
accaaggcaggggctgccgaaatgtcagaacgtatcaatcaacgactggcaaaatgggtc
attcagctaaatgatgacgagttaagagaagaattacaggctttgggggcgcgttacgat
cgtgatacgctagctttggcgagaacgctgtttgcacgggtgctggatgcgccgggtggc
ttacggatacaaacgatccatagcttttgccaatctttgctgacagcttttccggtcgag
gcggggcttataccgggattccggttgatcgaagggcgagatgagtccaccgaagctaag
aagaccctgactcgattacttgatcatcaaacaccaccttatcacatcaaagacgatgat
atcgctttattggcggaaacactcggtgagcagggtgccgaagagtatatctatcaatgc
cgctttcacgccttcgctttaaataatttaggggtggcgattgaaagtcgggtaaaacgc
gcgctggatttgccttttttagacatcaatcaggctttggaagaagcctgcgatgacgat
cattttgattttgcgcttcttcgacagatcgccgaagccaatgaaaaatggaatacagtt
accggtaaagatactattaaaactatcgatttatttgtagcggcacctccatcaggaaga
gtcaaattacttgaaaaccttttgcttgtaccttgtacaaaaggcggtgagcctaggagt
ataagagccggtctatccaaaatagcccccgaatataaagaatggatgatcgcccttgaa
aaggcgatttaccagattatcagcctaaaaaaacgccatgaattttcgaaattcgtgata
gcggcacttcgtactggacaagcctatagtcaggcatggcaacagaccaagaaagaatca
ggtctggtcgatttcaacgacatgattgaaaccagtgttgccttacttcggacgccgggt
atcggtgaatgggtgcgctataaattggatcggacaaccgatcatatcttggttgatgaa
gcgcaagataccaatattcttcaatgggctatcatctcggctttggccgaagatttcttc
tcgggtgaaagtgccaaatccgttgaagcctctcgcagtatttttgccgttggtgacttt
aaacaggccatttatggcttccaaggcacggatcctcaagcctttgttgatgctcgtgat
tattttaatgacaaatctcagggcagtggatgggaaattctcgatctgtctttaaaccgt
tccttccggtcaaccccggcgattctggcgatggtcgatcaaatgctggctgatattgag
agtagtggcggcggcattggtattagtcagcaagccctgcaaccgcatcaatcagcacgg
tctgatctgggcggaagcgttgtcttatggcaaccgatttccgattatcaggaagaaggc
gaaaatacttcagaagaggctaacatagatgatgaagaacagcttgaaaatggcgaatta
gaattagccatccgattagcacgccagatagacgcatggcttaatccgaaaacccctctt
tatctgcctgctttgggtcggaatgttgaagcgagggatatcctgattctggtgcgtaat
cgaggacggctggcttccttgattgtaggctgcctccatgctcaaaaaattcctgtcgcc
ggtctcgaccgtttaacattgactgcgcccttggctgtctctgatttgttatcggctatt
cgctttgtgttacaaccggatgatgatttaaccttggcctgtctgctggtttcgccattg
atcggctgggatcaagaccgactttataggcttgccgccaaaagagcgaaaaaagaaagt
ctctttgaccgccttcgtaaaagtgaagccgaaaaagagacatgggatattatgcgggaa
tggctttccaaggccgatttcattacgccctatcgcttccttgaaatgctattgagcggg
aagggggatggccgccgaaaattgttggaaaggcttggcgaagaggcgcgcgaccccatt
aacgaattgctgaatgccgctttgctgttggaaagcgaaacaaccccgtcttttcagcgt
tttctcgactggttcgatagcggagaggtcgaaatcaaacgtgacccatcggtacgacaa
aataccgtccgcatcatgactgtccatggtgcaaaaggcctacaagcccctgtcgttatc
ctcgctgatgccacccgagatccgcatcaatcaaacggcttcagaaaagaaatcatcact
tggccacttgatgaggcaaatgcgccaatcccgatgcctaggaatgacgatatcgcttat
ctcccttccgatttcggtgacatcatcaacgagaagaaggccaaagatttacaagagcat
tggcgacttctctatgtggcggcgacacgtgccgaagaatatctggtcatcaccggccat
cttggcagccgtgcgaaaaacattcccccaaaggacagttggtatgcctgcgcgacccga
gccatcacggctatgggtattgcatggcaagaagacactatgtggcaacagaaagcggtt
tatcattgggaaggccgtaaaaaagttaccgatataccgaagaagcaacctgccttgcct
aaagatgctatgccctcatggatcaaaaatgaaataccggaagaacccaaacccgcttat
ccattaagaccttctgatctggtaaaagataataccccgaacccgcctcctgatggcggc
tctatcacggctgcaaagcgagggactctgttacatgctttgtttgaacgccttcctatg
cttcctgttgaagaacgggaaaaggctggacttcgctggctcgagacttccgctggtgtc
aaggatgccgcgttacaaaatagcctcataaaagatgcctgcgatgcgatgaataaccct
gtttatcgcgatatcttttccgaaaaagctttggcagaagccccgattgcagccaaagtc
ggagaacatgttatttcaggaacggttgaccgtctttggatagatagggacaagaaacgg
gttcatatcgttgacttcaaaacaggcagacgggtgcctgcaaccaaagagcaggttagc
gaagcctatcaacggcagctagccgcctatatcgttgctttggaaaagatttttcccaat
tatgctatcgaagcgtctttgctttatacgacagccccaaaactggtctccttcgatcaa
tctttcatgcatgattattttatccaaatggacaaaggcgatattcagtcagagaatcag
atatag
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