Zymomonas mobilis subsp. mobilis ATCC 29191: ZZ6_0568
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Entry
ZZ6_0568 CDS
T02187
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
zmb
Zymomonas mobilis subsp. mobilis ATCC 29191
Brite
KEGG Orthology (KO) [BR:
zmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zmb03016
]
ZZ6_0568
Enzymes [BR:
zmb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ZZ6_0568
Transfer RNA biogenesis [BR:
zmb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ZZ6_0568
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AFN56466
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All DBs
Position
659191..660363
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AA seq
390 aa
AA seq
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MQIHPLITDSATLAALCSRLSRADFIAIDTEFIRENSYWPELCLIQIADDKEAAAIDPLA
PGLDMTPLTDLLVNNEDILKVFHAGGQDLEIILHHTGKMPFPLFDTQIAAMALGVGEQVG
YSNLVERYLSIKLDKGARFTDWSHRPLDRRQLDYAIADVTHLATLFPMLLKELRDKGRGA
WLDQEMERLADPSQYINDPEKSWLRIRMPNRKADILGRLKALAAWREIEAQNRNIPRGRI
AKDETLADLAIHPPRRQSDLVKVRGLSGSWGSNDIGQRLMEAIENAEALRPEEIPQRSDR
KLCIGKDGAMIADLLKLLLKMRARDAEVAARLIAKSDDIEGIIAGERENNPVLTGWRYDI
FGKEAIALIEGKMAFSVQKGKIAMTLIEKE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcatcctcttatcacagatagcgcaacgctagccgctctttgttcccgctta
tcccgggctgactttattgccatagataccgagtttattcgggaaaacagttattggccg
gagttatgcctgattcagatcgcggatgataaagaagccgcggccattgatccactggct
cctggcctggatatgacccctcttactgatttgttggtcaataatgaagatattcttaag
gtttttcatgccggagggcaggatcttgaaattattcttcatcacaccggcaaaatgccc
tttcctctttttgacacacaaattgccgctatggccttgggtgttggtgaacaggtcggc
tattcaaatctggtagaaagatatctttctatcaaattagacaaaggcgcaagatttaca
gattggtcacatcgcccgcttgaccggcggcagttggattacgccattgccgatgtcacc
catcttgcgacccttttccccatgctgttgaaagaattgcgggataaaggacgcggcgca
tggctcgatcaggaaatggaacggctggccgatccttcacaatatatcaacgatcccgaa
aaatcatggcttcgtatccgaatgccaaaccggaaagcggatatcctcggtcgcttaaaa
gccttggccgcatggagggaaatcgaagcccaaaaccggaatatcccaagggggcgtatc
gccaaagatgaaactttggctgatctggctattcatccccctcgccgtcaatccgatctg
gtaaaggtgcgcggactttcgggcagctggggcagtaatgacattggccaaaggctgatg
gaagccatcgaaaatgccgaggctttaagacccgaagaaattccacaacggagtgaccgg
aaattatgcatcggaaaagacggtgcaatgattgccgatttgctgaaattattgcttaaa
atgcgcgctcgtgatgccgaagttgccgcccgtcttatcgcaaaaagcgacgatatcgag
ggaattatcgcgggtgaacgcgaaaataatccggttttgactggctggcgctacgatatt
ttcgggaaagaggccattgccttgattgaaggtaaaatggctttcagcgtccaaaaaggc
aaaatcgccatgaccctgattgaaaaagaataa
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