Zymomonas mobilis subsp. mobilis ATCC 29191: ZZ6_0724
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Entry
ZZ6_0724 CDS
T02187
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
zmb
Zymomonas mobilis subsp. mobilis ATCC 29191
Pathway
zmb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zmb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ZZ6_0724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zmb03021
]
ZZ6_0724
03400 DNA repair and recombination proteins [BR:
zmb03400
]
ZZ6_0724
Enzymes [BR:
zmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ZZ6_0724
Transcription machinery [BR:
zmb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ZZ6_0724
DNA repair and recombination proteins [BR:
zmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ZZ6_0724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
AFN56619
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Position
complement(837703..838764)
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AA seq
353 aa
AA seq
DB search
MAVNAKNWQELKKPNALEKKASGNGKCKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITAIKIENVLHEFSSLNGVREDVTDIVLNIKQVAIKMQGDGSRRLHISRTGPGVVTAGDI
AVSGDIEVMNPELVICHLDQGAVFNVELTVDTGKGYVAAVANRPADAPIGLIPVDALYSP
VRQVAYKVENARVGQELDYDKLLLTIETDGTISPEDAIAYSARILQDQLQLFVHFDDGLA
PPTSAIGQSSLPSSSSEAENSANQLNRNLLKKVDELELSVRSANCLKNDNIIYIGDLVQK
TEAEMLRTPNFGRKSLNEIKEVLSGMGLRLGMEIPGWPPENIEEMAKKLEQEY
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtcaacgctaagaactggcaggaacttaaaaagcccaacgccctggaaaagaaa
gcgagcgggaacggcaaatgcaaggcaacttttgttgccgagccattagagcgcggcttt
ggtctgacgcttggtaatgcactgcgccgtgtgctgttatcttcactgcaaggggcagcc
attacggctatcaagatcgaaaatgtgttgcatgaattctcgtccctgaatggggttcgt
gaagatgtgaccgatatcgttcttaatatcaagcaggtcgcgattaaaatgcagggagac
ggtagccgtcgccttcatatttctcgtaccggcccaggtgtggttactgccggcgatatt
gctgttagcggtgatatcgaggtgatgaatccagaattagtgatctgtcatcttgatcag
ggtgccgtctttaatgttgaattgaccgttgataccggcaaaggctatgttgccgctgtg
gctaaccgtccggcagatgcacctattggtcttattccggttgatgcgctttattctccg
gtaagacaggttgcatataaagtcgaaaatgcccgcgttggtcaggaactcgattacgac
aagcttttgttgacgatcgaaaccgatggtaccatttcgccggaagatgcgattgcttat
tcagcccgtatccttcaggatcaacttcagctctttgtccactttgatgacggtctggct
ccgccaacctctgctattggacagagttcgctgccttcttccagcagcgaagctgaaaat
agtgctaatcagcttaatcgtaaccttctcaagaaggttgacgaattagaactctctgtt
cgttctgctaactgtctcaagaatgacaatatcatttacatcggtgatcttgtccagaag
actgaagcagaaatgctgcgcaccccgaattttggccgtaaatccttgaatgaaatcaag
gaagtgctgtccggtatgggattgcgtctgggtatggaaatccctggttggccgcctgaa
aatattgaggaaatggccaaaaagctcgaacaggaatattga
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