Zymomonas mobilis subsp. mobilis ATCC 29191: ZZ6_0987
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Entry
ZZ6_0987 CDS
T02187
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
zmb
Zymomonas mobilis subsp. mobilis ATCC 29191
Pathway
zmb03030
DNA replication
zmb03410
Base excision repair
zmb03420
Nucleotide excision repair
zmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZZ6_0987
03410 Base excision repair
ZZ6_0987
03420 Nucleotide excision repair
ZZ6_0987
03440 Homologous recombination
ZZ6_0987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zmb03032
]
ZZ6_0987
03400 DNA repair and recombination proteins [BR:
zmb03400
]
ZZ6_0987
Enzymes [BR:
zmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ZZ6_0987
DNA replication proteins [BR:
zmb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ZZ6_0987
DNA repair and recombination proteins [BR:
zmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ZZ6_0987
NER (nucleotide excision repair)
GGR (global genome repair) factors
ZZ6_0987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
DNA_polI_exo1
Taq-exonuc
HHH_2
DprA_N
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AFN56877
LinkDB
All DBs
Position
complement(1125491..1128256)
Genome browser
AA seq
921 aa
AA seq
DB search
MTEYSDKPHLILIDGSGYIFRAYHRLPPLTNKAGLPAGAVYGFTTMLWKLVENIRKQDDA
PTHFAVIFDSSRKSFRQDLYPAYKAHRPPPPEDLVPQFPLIREATRAFSVPSIEQEGLEA
DDIIACYSRVALERGFQVTVYSSDKDLMQLIQPRLNLFDPVNNCLIGSEQVVKKFGVVPE
KLGDLLALMGDTADNIPGVPGVGPKTASRLINEYGNLSEILESAPEIKQPKLRQNLIEYK
ETAILSRELVALVDDKPLPEPLDNLVVKGVDMTPLRDFLSEQGFSSLLARAGGGQSAPVA
DGSKEMAASSSQRFDPDAYETVIDEKALDRWIADIYQKGQVAVDTETDNLDATQARLVGV
SLSTEAGKACYIPCGHGGHDLLDQKPDQMDLSLLVKKLKPVLEDPSILKIGQNIKYDMIV
LSRYGISVQPFDDTMLLSYDLDAGRHGHGMDELSLLYFDHQPISFKSVCGTGKSAITFNH
VPIPAATRYAAEDADVTFRLWEILKPRLSSEGATRIYEEVDRPLPPVIARMEQAGITVDS
AALRHLSFRFAHDISRLEEEIYVLAGCRFLISSPKQLGEVLFGTMGLAGGKKSKSGQYST
NVTELERLAAEGEVIASKILEWRQLSKLKSTYSDALIGKVNPETGRVHTSFSLVGAQTGR
LSSTDPNLQNIPIRTEIGREIRNAFIAKKGHLLLSADYSQIELRLAAHVADEKALLQAFR
EKEDIHALTAKQLFGHVDRESRARAKTINFAILYGISAWGLAARLEIDRFSAQEMIDRYF
ERFPAIRHYIDRTLDFVRLHGYVETPFGRKTHLPAIKSRKVTERQAAERQAINAPIQGMS
ADIIKRAMVRMEPTLAKAGLSSVKMLLQVHDELIFEVPEEDIEKAKPVIRQVMMEAALPI
VQLSVDLEVEIGTGISWGAAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaatattctgataagccccatcttattctgatcgatggatcgggttatattttt
cgtgcctatcatcgtctccccccgttaacgaacaaggctggactgcctgcgggagcggtt
tatggttttaccaccatgctttggaagctggtggaaaatatccgcaagcaggatgatgcc
ccgacccattttgcggttatttttgattcaagccgcaaaagttttagacaggatttatat
ccggcctataaagcccatcggccgccgccgccggaagatttggtgccgcaattcccgctt
atcagagaagcgacccgcgccttttctgtgccttctatcgagcaggaaggtttggaagcc
gatgatattatcgcctgttattcacgagttgccttagaacgcggatttcaggtgacggtc
tattcttcggataaagatttgatgcagttgattcagccgcgattaaatctttttgatccg
gtgaacaattgcctgatcggttcggaacaagttgttaaaaaatttggtgttgtgcctgaa
aaattgggcgatcttctcgccttgatgggggataccgccgataatatacctggggttccc
ggtgtgggcccgaagactgccagccgccttatcaatgaatatggtaatctgagcgagatt
ttggaatcagcgccggagatcaagcagccaaaattaagacaaaatctaatcgaatataaa
gaaacggctattttatcccgtgaattggtagctttggttgatgataagcctttacccgaa
ccactggataatctggtggtgaagggggttgatatgactcctttgcgggatttcttgagc
gagcagggcttttcttctttattggcgagagctgggggagggcagagcgcacctgttgct
gatggtagtaaagagatggccgcttcttcttcgcagcgtttcgaccctgatgcctatgaa
accgtgattgatgaaaaagctttggatcgctggatagcggatatctatcaaaaaggtcag
gtcgcggtagataccgaaaccgacaatctggatgccacccaagcgcgattagtcggtgtt
agtttgtccacggaggcagggaaagcctgttatatcccttgtgggcatggaggccatgat
cttcttgaccagaagcccgatcaaatggatttatcgcttcttgtcaaaaagttaaagcca
gttttggaagatccctctattctgaaaatcggtcagaatatcaaatatgatatgattgtt
ctgtcccgatatggaatttcggttcagcccttcgatgataccatgcttttgagctatgat
cttgatgcgggtcgccatggccatggtatggatgaattgagtcttttgtattttgaccac
cagcccatcagttttaaatccgtatgtggcaccggcaaatcggcgataacctttaaccat
gtccctattccagcggcaacacgttatgctgccgaagatgcagatgtcaccttccggtta
tgggaaatattaaaaccgcgtttgtcatcagagggcgcaacccgtatttacgaagaggtt
gatcgtcctttgccgccggtgattgcccgtatggagcaggccggtattacggttgatagt
gcggccttacgtcatctctctttccgttttgcgcatgatatcagccgtctcgaagaagaa
atctatgtcttggcaggctgccgtttcttgatttctagcccaaagcagttgggtgaagtg
ttgttcgggacgatggggcttgctggtggtaaaaagagcaaaagcggacaatattctact
aatgtcacggaattagaacgattagcggccgaaggtgaggtgattgcctccaagattttg
gaatggcggcagctttcaaagctgaaaagcacctatagtgatgccttgattggcaaggtc
aatcctgaaacggggcgtgtccataccagctttagtctggttggggcgcagactggccga
ttatcttctactgatccgaatttgcagaatatccctatccgcaccgaaattggtcgggaa
atcagaaatgcctttatcgcaaaaaaagggcatctgttattatcggctgactattcacag
atagagttgagattggcggcgcatgtagccgacgaaaaagccttattacaagcttttcgg
gagaaagaagatattcacgctttgacagccaaacagttatttggtcatgtcgatcgtgaa
agtcgagcgcgtgccaagaccatcaattttgctattctctatggtatttcggcttggggt
ctggcagcgcgactggaaatagaccgtttttcagcgcaggaaatgatagaccgctatttt
gagcgctttcctgctattcgtcactatattgatcggacattggattttgtccgtttgcat
ggctatgttgaaacgccttttggtcgtaagacccatttgcctgcgataaaaagccgtaaa
gtgacagaaagacaagccgctgaaagacaggcgatcaatgcgcctattcaaggcatgtct
gccgatattatcaagcgagccatggtgcgaatggagcctaccttagcaaaagccggactt
tcttcggtaaaaatgcttttacaggttcatgatgaactgatttttgaagtccccgaagaa
gatattgaaaaagcgaaacctgttattcgtcaggtgatgatggaggcggctttaccgatt
gttcagttgtcggttgatctggaagtagaaatcggcacggggataagttggggtgccgca
cattga
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