Zymomonas mobilis subsp. mobilis ATCC 29191: ZZ6_1664
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Entry
ZZ6_1664 CDS
T02187
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
zmb
Zymomonas mobilis subsp. mobilis ATCC 29191
Pathway
zmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ZZ6_1664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmb03019
]
ZZ6_1664
Enzymes [BR:
zmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ZZ6_1664
Messenger RNA biogenesis [BR:
zmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ZZ6_1664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
HEAT_DAAF5
AAA_22
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AFN57521
LinkDB
All DBs
Position
complement(1905616..1906992)
Genome browser
AA seq
458 aa
AA seq
DB search
MTETSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAF
ALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIG
RQMRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKL
LPKNRQTLFFSATMPKTIQELSSQFLSDPVTVSVAPQSSTAERVEQFGIFVNQSEKQALL
TITLKNTPGLDRALVFTRTKHGADRVVRHLEAAGLPAAAIHGNKSQPQRERALNAFRNGR
LKILVATDIAARGIDVPGVSHVFNYELPNVAEQYVHRIGRTARAGRDGQAISFIANDERS
YLRSIERLTRVKLQILPLPENFVMEKELLPHPAPIRPERDGRDGRGGRGAGRGRFGGGAK
PGFNHSHGKGDDRGDRGGERPRRPRRPQMRGVRAVARS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaacatctgtttcgttcaaaacccttggtctcgactcgtcacttgtgcaggct
ctggatggcctcggttacagtaagccgaccccgattcaggcacaagctatcccccattta
ttagaaggcaaggatctttgcggtatcgcccagaccggcaccggtaaaaccgcagccttt
gctctgccttctattcattatctcgcaaccaacccgcaggcacggcctcagcgtggttgc
cgtatgctgattttatcaccgacgcgcgaactggccagccagattgcccgcgcttgcaat
gactatacccgtcatctgcgtatgtcggttaatgccgtatttggtggcgttcctattggt
cgtcagatgagaatgctggatcgtggcaccgatattttggttgcaacgcccggtcgcttg
ctggatttgatcgaccagcgcgcgcttgtcttaaaagacgtcgaagttttcgtcttggat
gaagccgaccagatgctggatcttggttttatccatgcgttgcgtcgcattgataaattg
ctgccgaagaaccgccagactttgttcttctcggctacgatgccaaaaacgattcaggaa
ttgagcagtcagttcttgtctgatccggtaaccgtttcggttgcgccccagtcttcaacg
gctgaacgggttgagcaattcggtattttcgttaaccagtctgaaaaacaggctttgttg
acgattacgctgaaaaatacccctggccttgatcgggctttggtctttacccgcacgaag
catggtgccgatagagtggttcgccatttggaagccgcgggtctgcctgctgccgccatt
catggtaacaaaagccagccgcagcgtgaacgcgctttaaatgcgttccgtaatggtcgg
ttaaaaattctggtggccaccgatattgctgcccgtggtattgacgttccgggtgtcagc
catgtcttcaattacgaattgccgaatgtcgccgaacaatatgtccatcgtattggtcgc
actgcccgcgctggtcgtgatggtcaggctatcagctttattgccaatgacgaacgctct
tacttgcgctctatcgaacgtttgacccgtgtcaaattgcagattttgccgctgcctgaa
aactttgtcatggaaaaagaattgctgccgcatccggctccaatccgtccagaacgggat
ggcagagatggtcgcggtggtcgtggcgctggtcgcggtcgcttcggcggcggtgcaaaa
ccgggtttcaaccattctcatggtaaaggtgatgatcgtggtgatcgcggtggtgaacgt
ccgcgtcgtccgcgtcgtccgcagatgcgtggtgttcgtgccgttgctcgtagctaa
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