Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: A265_00575
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Entry
A265_00575 CDS
T03385
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
zmc
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Brite
KEGG Orthology (KO) [BR:
zmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zmc03016
]
A265_00575
Enzymes [BR:
zmc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A265_00575
Transfer RNA biogenesis [BR:
zmc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A265_00575
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHJ72054
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Position
661995..663167
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AA seq
390 aa
AA seq
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MQIHPLITDSATLAALCSRLSRADFIAIDTEFIRENSYWPELCLIQIADDKEAAAIDPLA
PGLDMTPLTDLLVNNEDILKVFHAGGQDLEIILHHTGKMPFPLFDTQIAAMALGVGEQVG
YSNLVERYLSIKLDKGARFTDWSHRPLDRRQLDYAIADVTHLATLFPMLLKELRDKGRGA
WLDQEMERLADPSQYINDPEKSWLRIRMPNRKADILGRLKALAAWREIEAQNRNIPRGRI
AKDETLADLAIHPPRRQSDLVKVRGLSGSWGSNDIGQRLMEAIENAEALRPEEIPQRNDR
KLCIGKDGAMIADLLKLLLKMRARDAEVAARLIAKSDDIEGVIAGERENNPVLTGWRYDI
FGKEAIALIEGKMAFSVQKGKIAMTLIEKE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcatcctcttatcacagatagcgcaacgctagccgctctttgttcccgctta
tcccgggctgactttattgccatagataccgagtttattcgggaaaacagttattggccg
gagttatgcctgattcagatcgcggatgataaagaagccgcggccattgatccactggct
cctggcctggatatgacccctcttactgatttgttggtcaataatgaagatattcttaag
gtttttcatgccggagggcaggatcttgaaattattcttcatcacaccggcaaaatgccc
tttcctctttttgacacacaaattgccgctatggccttgggtgttggtgaacaggtcggc
tattcaaatctggtagaaagatatctttctatcaaattagacaaaggcgcaagatttaca
gattggtcacatcgcccgcttgaccggcggcagttggattacgccattgccgatgtcacc
catcttgcgacccttttccccatgctgttgaaagaattgcgggataaagggcgcggcgca
tggctcgatcaggaaatggaacgactggccgatccttcacaatatatcaatgatcccgaa
aaatcatggcttcgtatccgaatgccgaaccggaaagcggatatcctcggtcgtctcaaa
gccttggccgcatggcgcgaaatcgaggcacaaaaccgtaatattccaaggggtcgtatc
gccaaagatgaaaccttggctgatctggctattcacccccctcgccgacaatccgatctg
gtaaaggttcgcggactttcgggcagctggggcagtaatgacattggccaaaggctgatg
gaagcaatcgaaaatgccgaggctttaagacccgaagaaattccgcaacgcaatgaccga
aaattatgcatcggaaaagacggtgcaatgattgccgatttgctgaaattattgcttaaa
atgcgcgctcgtgatgccgaagttgccgcccgccttatcgcaaaaagcgacgatatcgag
ggagttatcgcgggtgaacgcgaaaataatccggttttgactggctggcgctacgatatt
ttcgggaaagaggccattgccttgattgaaggtaaaatggctttcagcgtccaaaaaggc
aaaatcgccatgaccctgattgaaaaagaataa
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