Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: A265_00697
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Entry
A265_00697 CDS
T03385
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
zmc
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Pathway
zmc03420
Nucleotide excision repair
zmc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A265_00697 (uvrD)
03430 Mismatch repair
A265_00697 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmc03400
]
A265_00697 (uvrD)
Enzymes [BR:
zmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A265_00697 (uvrD)
DNA repair and recombination proteins [BR:
zmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A265_00697 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
A265_00697 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_22
Alkyl_sulf_dimr
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AHJ72175
LinkDB
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Position
796495..798801
Genome browser
AA seq
768 aa
AA seq
DB search
MTDSLYSSFSAETPPEPDYLARLNPEQKEVVRTTEGALLVLAGAGTGKTAALTARLAYLV
ETLKAWPSQILAVTFTNKAAREMQMRVGDLLGSQAENMPWLGTFHSIAAKMLRRHAELVG
LKSDFIILDTDDQIRLLKQLIQGQGIDEKQWPAKQLAGIIDRWKNRGLTPDKIAGKEEDS
FADGQGAALYLAYQKRLLSLNACDFGDLLLHMLVILTQHREVLDSYHDRFRYIMVDEYQD
TNQAQYLWLRLLAQKNRNICCVGDDDQSIYSWRGAEVANILRFEEDFPGAKIIRLEHNYR
STPQILGAASGLITHNNARLGKTLWTERDQGEKVKIIGVWDGAEEARQLVADVQNLRRAN
IPLNKMAILIRAQFQSREFEDIFIAKNLPYRIIGGFRFYERAEIRDALAYLRVIAQPTDD
LAFERIVNVPKRGIGKKAMEKLYQAAFLDRIPLAEAAEKLVSEKTLGSKITQSLGQLMND
FSEWRKSLSVVSHADVTRKMLDESGYKVMLRAVNDVQSAGRLENLTELARAMEEYDDLGS
FLEHVSLVMDHENDPIDDKITLMTMHAAKGLEFDHVFLPGWEEGVFPSQRSLDEGGLNSL
EEERRLAYVGITRAKKCCTIFHAANRRVYGQWIASTPSRFISELPDDHIEEKSLLRKKTP
IWRDIWAEDRSKNPAYNSAKEAITPPWQLASRRGAGWQRAQKAAASPSPAVSHPLKKKDS
PQYKIGDTVKHAKFGQGVVNEVDGDKVTVEFHDKDVGIKKLLSQFVSL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
gtgactgactccttgtattcatctttttcagccgaaaccccaccagaacctgattatctg
gcacgcctcaatcctgaacagaaagaggttgtcaggacgacagaaggcgcccttttggtt
ctggcaggggcaggaacgggcaaaacggccgctttgacagcaaggctggcttatctggtc
gaaaccctgaaagcatggccttcgcaaatcttggcggtgacctttaccaataaggctgcc
cgcgaaatgcaaatgcgggtaggtgatttgctgggcagtcaggcagaaaacatgccttgg
ctaggcacttttcattccatcgcggcgaaaatgctgcgccgtcatgccgaattagtcggg
ttaaaatccgattttattattcttgatactgacgatcaaattcggcttttgaaacagctt
atccaagggcaaggcattgatgaaaaacaatggccagccaaacaattggcaggcattatt
gaccgttggaaaaatcggggtttaacacccgataaaattgcagggaaagaagaagatagc
tttgctgatggtcaaggtgctgcgctttatctggcctatcaaaaaagactgttaagcctg
aatgcctgtgattttggcgatctgcttttgcatatgctggttattttgacccagcatcga
gaggttctggacagctatcatgatcgtttccgttatatcatggtggatgaatatcaggat
accaatcaggcacaatatttgtggttaaggttattagcccagaaaaaccggaatatttgc
tgtgttggcgatgatgaccagtctatctatagctggcggggtgctgaagtcgccaatatt
cttcgttttgaggaagatttcccgggcgcaaagattatccgtctggaacataattatcga
tcaacaccgcagattcttggtgcggcatcagggctgattacccataataatgctcgcctt
gggaaaaccttgtggacggaaagggatcagggcgaaaaagtcaaaattataggcgtttgg
gatggcgcagaagaggcaaggcaacttgttgccgatgtccaaaatctgaggcgtgccaat
attcccctgaacaagatggcaattcttattcgcgcccaatttcagagccgcgaatttgaa
gatatttttatagcaaagaacctcccctatcgtattatcggtggcttccgtttttatgaa
agagcggaaataagggatgccttggcctatcttcgagttattgcccaaccgacagacgat
cttgcctttgaacgtattgttaatgtgccgaaacgcggtattggcaaaaaggcgatggaa
aagctttatcaagcggcctttcttgatcgcattcccttggccgaggctgctgaaaaactg
gtttcagaaaaaacactgggaagcaaaataacgcagtcgcttggccagttaatgaatgat
ttttctgaatggcggaaaagcctgtccgtcgtcagccatgctgatgttacccgaaagatg
ttggatgaatccggctataaagtgatgcttcgcgctgtgaatgatgtccaatctgcgggg
cggttagaaaatctgaccgaattagcgcgcgcaatggaagaatatgatgaccttggcagc
tttcttgagcatgtcagcttggtcatggatcatgaaaacgatccgatagatgataaaatc
accctcatgacgatgcatgccgccaaaggcttggaatttgaccatgtctttttacccggg
tgggaagaaggtgtttttccatcgcagcggtcattagatgaaggtggcctcaacagtctg
gaagaagaaagacgcttggcctatgtcggtataacccgtgccaagaaatgctgcaccatt
tttcacgcggccaatcgcagagtttatggtcagtggatagcttcgacaccctcgcgtttt
atcagcgagttaccagacgaccatatagaagagaaatcacttcttcgaaaaaagacccct
atatggcgtgacatatgggcagaagatagatccaaaaatccggcttataattctgcaaaa
gaagctattacgccgccatggcaattagctagtcgtcggggtgcaggttggcaaagggcg
caaaaagcggccgcttcgccctctcctgcggttagccatccattaaagaagaaggacagc
cctcaatataagattggcgacacggtaaaacatgccaaatttggtcaaggtgtcgtcaat
gaagtggatggggacaaggtaacggtcgaatttcacgataaggatgtcggcatcaaaaaa
ctactttcgcagtttgtctccttgtaa
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