Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: A265_00707
Help
Entry
A265_00707 CDS
T03385
Name
(GenBank) ATP-dependent RNA helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
zmc
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Brite
KEGG Orthology (KO) [BR:
zmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmc03019
]
A265_00707
Enzymes [BR:
zmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A265_00707
Messenger RNA biogenesis [BR:
zmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A265_00707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
AAA_11
UvrD-helicase
nSTAND3
Herpes_ori_bp
Flavi_DEAD
DUF1400
Motif
Other DBs
NCBI-ProteinID:
AHJ72184
LinkDB
All DBs
Position
complement(808234..810747)
Genome browser
AA seq
837 aa
AA seq
DB search
MLKNNALLKELPVSSIFEPLAETLRNRSNAVIIAPPGSGKTTAIAPILLQEDWCQGQVIL
LSPRRLAAKAAAERIAQIMGEPVGQTVGYLTRMESQRSDKSRILVVTQGIFRHQIQQDPE
LPNISAVLFDEVHERSLDSDFSLALALDVQSALRPDLRLIAMSATMDGTRFSDLMAEEGA
DKASLLESQGRCYPLHYYYEGRRPDLSIEQNMATVIRRALLENDGGILAFLPGIAEIERT
AALLENLPSDILLYRLHSSVDFREQHAAIQAVPKGYRKIVLASAIAETSLTLDGIRIVVD
SGLTRRARYDRQSGLTRLVTERVSRASAEQRAGRAGRQDVGYVWRLWEEAAQVGLSPYDP
PEITEADLSALTLDCALWGVTPNQLRWIDSPPEKAIEEAYKRLENLQAISSDKRPSPHGR
DLAALPMPLPFGHMILKAKAKGWGALAVDVAVLLSERGIGGMDIDIENRLNRFYREKTLR
SQKARQLANRWRKQVGLTISSKRDVIEMGDVGACVALAFPDRVAKRRDAKGEQWISAGGR
GFRLDPLSPLAQSEWLAVAEAQGSAQSARILSAATLTTEQINALFSEKIVVEQNVRFNFA
TKSVETERLQRLGAIILSRGQDDSPDEEAIASALMEAVQQYGLDILPWSDAALALRERWA
FVAAHQSEEKAFSDGGLSDDTLLSKVDEWLYPLLLGCRRLDQIKASDLTQALENILGWQG
KQQLDQWVPARLITPAGSSHVIDYKADGGPAVEVRPQALFGMKKHPMLLNGRVALVLRLV
SPAGRPIQTTQNLTDFWAGSWNMIAKEMRGRYPRHPWPEDPASAEPTLRTQKGRKVS
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaataatgcccttctgaaagaattgccggtttcttctatttttgagccattg
gctgaaacactcagaaatcgaagcaatgcggttatcatagcgcctccggggtcaggtaaa
acaacggcgattgcaccgattttgttacaagaagattggtgccaagggcaggttatcctg
ctttcgccgcgtcgtttggcagccaaggcagccgctgaacgcatcgcgcaaataatgggg
gaacctgtcggccagacggtcggatatctgaccagaatggaatcgcaacggtcagataaa
agccgcatcttggtcgtgactcaagggatatttcgccatcagattcaacaagaccctgaa
ttaccgaatatctcggcagttttatttgacgaagttcacgaaagaagccttgatagcgat
ttttccttagctttggccttggatgtgcaatctgctttgcgccctgacttacgattgatc
gcaatgtcggcaaccatggacgggacacgcttttccgatctcatggcagaagagggcgct
gataaagcgtctcttcttgaaagccaagggcgatgttatcccttacattattactatgaa
ggccgccgtcctgatctttcaatcgaacagaatatggcgactgttattcgtcgggcttta
ctggaaaatgacggtggtattctcgcttttttaccgggtatcgccgagatagaacgcact
gcggctttattggaaaatctaccttccgatatcctgctctatcgtttgcatagttccgtt
gattttcgggaacagcatgcagctattcaggccgtgccaaaaggatatcgcaaaattgtt
ctggccagtgcgattgccgaaaccagcctaacattggatggtatccgcatcgttgttgat
tccggtttgacaagacgggcgcgttacgatcgtcaatcaggtttaacgcgattggttact
gaacgcgtcagtcgggcatcggctgaacagcgcgccggtcgtgctggtcggcaagatgtc
ggttatgtctggcgattatgggaagaagctgcccaagtcggtttatcgccttacgatcct
cctgaaataacagaagccgatttgtcggctttgacattggattgtgctttatggggggta
acaccaaatcaattacgctggattgattccccaccggaaaaagcgatagaagaagcctat
aaacgcttagaaaatttacaggcgatttcttccgataagcgtccttcgccgcatggccgt
gatctggcagctttgccaatgccgttaccttttggtcatatgatattgaaggcaaaggca
aagggctggggggctttggccgttgatgtcgccgttttgctttccgagcgcggcatcggc
ggcatggatattgacatcgaaaaccgtctcaatcgtttttatcgtgaaaaaacactccga
tcacaaaaagcacgtcaacttgccaatcgatggagaaaacaggtcgggttaactatttcc
tccaaaagggacgtgatcgagatgggcgatgtcggggcttgtgtggctttggcttttccc
gatcgtgtcgcaaaaaggcgtgatgccaaaggcgaacaatggatttccgctgggggcagg
ggattccgattagacccattatcgcctttggcacaaagtgaatggttagccgtggccgag
gcgcaaggctcggcacaatcggcacgtattctgtcagctgcaactttaacgacagagcaa
atcaacgctcttttttctgaaaagatagtggttgaacaaaatgtccgttttaattttgca
accaaatctgttgaaaccgaacgcctacagcgattgggtgccattattctatcacgggga
caggatgattcccctgatgaagaagcaatcgcatcggctctgatggaggctgtccagcaa
tatggtcttgatattttaccgtggtcggatgcagctttagctttgcgggaaagatgggct
ttcgtggcagcacatcaatcagaagagaaagccttttctgatggtggattaagtgatgat
acccttttgtctaaagtcgatgaatggctttatcctttgctgttgggatgccgtcgtttg
gatcagataaaggcgtctgacctgacacaggccttagaaaatatactgggatggcaaggt
aaacagcagctcgatcaatgggttccggctagattgattacgcctgccggtagtagtcat
gtcattgattacaaagcagacggtgggcccgcggttgaagtccgtccgcaggctctattt
gggatgaaaaagcatccaatgcttttaaatggtcgggtggctttggtgttaagactggtt
tctccagcgggtaggcctatccagacaacccaaaatttaactgatttttgggcgggtagt
tggaatatgattgcgaaagaaatgcgcggtcgatatccacgccacccttggccagaagac
cccgcctcagcagaaccgaccttaagaacacaaaaaggccgaaaagtaagctaa
DBGET
integrated database retrieval system
