Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: A265_00721
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Entry
A265_00721 CDS
T03385
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
zmc
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Pathway
zmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A265_00721 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmc03019
]
A265_00721 (pnp)
03016 Transfer RNA biogenesis [BR:
zmc03016
]
A265_00721 (pnp)
Enzymes [BR:
zmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A265_00721 (pnp)
Messenger RNA biogenesis [BR:
zmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A265_00721 (pnp)
Transfer RNA biogenesis [BR:
zmc03016
]
Prokaryotic type
tRNA degradation factors
A265_00721 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
DUF7357
Motif
Other DBs
NCBI-ProteinID:
AHJ72198
LinkDB
All DBs
Position
824752..826998
Genome browser
AA seq
748 aa
AA seq
DB search
MFDIKRQEIDWGGKKLTLETGQVARQADGAVIATLGETVVLCAVTAAKTVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATERETLISRLIDRPIRPLFPEGFYNETLVIAQVMSY
DGENEPDILAMIAASAALALSGVPFLGPIGAARVGYQDGEFILNPTLEQLEKSDLDLVVG
ATRDAVMMVESEANELPEEVMLNAVSFAHESLQPVIKAIINLAEQAAKEPWELVSYDDSA
LAAKVEELCYDNFDKAYRLTRKAERVEALSKAKAVLDEAFPEADPTEKLRIQKLAKKLEA
KIVRTAILKEGRRIDGRDLKTVRPIRSQVGFLPRTHGSALFTRGETQALVSTTLGTADAE
QMIDGLTGLHYERFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPVLPSKADFP
YTIRVLSDITESNGSSSMATVCGGCLALMDAGVPLTRPVSGIAMGLILEKDGFAILSDIM
GDEDHLGDMDFKVAGTEKGITSLQMDIKVAGITEEIMQKALEQAKGGRAHILGEMSKALG
EVRSEISNLAPRIETMSVPKDKIRDVIGTGGKVIREIVATTGAKVDIEDDGTVRLSSSDP
ANIEAAREWINGIVEEPEVGKIYNGKVVNIVDFGAFVNFMGGRDGLVHVSEIKNERVNKV
SDVLSEGQEVKVKVLEIDNRGKVRLSMRVVDQETGAELDDNRPPRENAERRGGERPRRDR
GPRRESGDRPARRDMEPEFAPAFLRKDS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatattaaacgccaggaaatcgattggggcggaaaaaaactgacactggaaacc
ggacaggttgcccgtcaggcagatggcgccgtcattgcgaccttaggtgaaacggtcgta
ttatgcgcggtaacggcagcaaaaacggtaaaagaaggtcaggatttctttcctttgacc
gtccattatcaggaaaaatattcagcagcaggccgtattcccggtggctttttcaagcgt
gaacgtggcgcaaccgaacgggaaacgctgatttcacggttaatcgaccgtccaatccgt
cctctgtttccggaaggtttctataacgaaaccttggtcattgcgcaggtcatgtcctat
gacggcgagaatgaaccggatatcttggcgatgatcgccgcttctgcggctcttgctctt
tccggtgtgcctttcttgggccccatcggtgctgcccgtgtgggttatcaagatggcgag
ttcattcttaacccgaccttggaacagcttgaaaaaagcgatcttgatctggttgtcggg
gctacccgtgatgccgtgatgatggttgaatcggaagcgaatgagcttcccgaagaagtc
atgctcaatgccgtttcttttgcacatgaatctttacagccggttatcaaagctatcatc
aatctggcagaacaggccgctaaagagccttgggaactggtcagctatgatgacagcgca
ttggctgccaaagtcgaagaactctgctacgacaatttcgataaggcctatcgtctgact
cgtaaggctgagcgtgttgaagccttgagcaaggccaaagcggttcttgacgaagccttc
ccagaagctgatccgacagaaaagctgcgcatccagaagctcgcgaagaagctggaagca
aaaatcgtccgcaccgccattctgaaagaaggccggagaattgacggacgcgatctgaaa
acagttcgtccgatccgctctcaggttggattcttgccccgcacgcatggttctgccctg
tttacgcgtggtgaaacacaggctttggtttcaaccacccttggaacggcggatgctgaa
cagatgatcgacggtttaaccggccttcattatgaacgcttcatgctgcattataacttc
cctccttattcggtcggtgaagttggtcgttttggtgctccgggtcgtcgtgaaatcggc
catggtaaactggcatggcgtgcgcttcatccggttttgccgagcaaggctgatttcccg
tataccatccgcgttttgtcggatatcaccgaatctaatggttcctcttctatggcaacc
gtttgcggtggctgccttgcattgatggatgccggtgttcccttaacgcgtccggtttcc
ggtatcgccatgggtcttattctagaaaaagacggcttcgctattctgtccgatatcatg
ggtgatgaagatcacttgggtgatatggactttaaggtcgccggtaccgaaaaaggtatc
accagcctccagatggacatcaaggttgctggcattaccgaagaaatcatgcagaaagct
ttggaacaggctaaaggtggccgtgctcatatcttgggtgaaatgtccaaagcgctgggt
gaagtccgctccgaaatttctaatttggcaccgcgcattgaaacgatgagcgtaccaaaa
gacaaaatccgtgatgttatcggaacgggcggaaaagttatccgtgaaatcgtggcaacc
acaggtgccaaggtcgatatcgaagatgacggaacggttcgtctgtcttcttccgatcct
gccaatattgaagcagcccgtgaatggatcaatggtattgttgaagaaccggaagtaggc
aaaatctataacggtaaagtcgtcaatatcgttgatttcggtgccttcgtaaacttcatg
ggtggccgtgacggcttggtacatgtttcggaaatcaagaacgaacgtgtcaacaaggtc
agcgatgtcctctccgaaggtcaggaagtcaaagtcaaggttcttgaaattgacaaccgt
ggcaaggttcgcctgtctatgcgtgttgtcgatcaggaaaccggcgcagagctggatgac
aaccgtccgccacgtgagaacgcagaacgtcgcggtggtgagcgtcctcgtcgtgatcgg
ggccctcgtcgggaatctggcgatcgtccggcaagacgtgacatggaaccggaatttgct
ccggcattcctgcgcaaagatagctaa
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