Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: A265_01074
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Entry
A265_01074 CDS
T03385
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
zmc
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Pathway
zmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A265_01074 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmc03400
]
A265_01074 (ruvB)
Enzymes [BR:
zmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A265_01074 (ruvB)
DNA repair and recombination proteins [BR:
zmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A265_01074 (ruvB)
RecFOR pathway proteins
A265_01074 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
Sigma54_activat
AAA_3
nSTAND3
Rad17
NB-ARC
AAA_16
AAA_22
AAA_17
TsaE
Bac_DnaA
AAA_18
AAA_14
AAA_28
RNA_helicase
ABC_tran
AAA_33
DUF2336
AAA_25
AAA_24
NACHT
Parvo_NS1
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AHJ72539
LinkDB
All DBs
Position
complement(1223570..1224613)
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AA seq
347 aa
AA seq
DB search
MTRNSLLNPEAENADPDQALRPRSLDEFIGQQAARENIRVFIEAAKKRQESLDHVLFFGP
PGLGKTTLAQIIAREMGVGFRATSGPVIVKSGDLAALLTNLEDGDVLFIDEIHRLQPVVE
EVLYPAMEDRALDLMIGEGPSARSVRIDLPHFTLVGATTRQGLLSTPLRDRFGIPVRLQF
YSIAELRQVITRAARLLGMEIAPEGAEEIAKRSRGTPRIAGRLLRRVRDFADVAGSKIVD
RFIADEALNRLEVDKLGLDLMDRRYLMMIADIYKGGPVGLDTLAAGLSEPRDTVEEVIEP
YLIQLGLVARTARGRQLNGLAWRHLGLTDPREAEGKHSEIKNQPGLL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcaatagcttattaaatcccgaagccgaaaatgctgaccccgatcaggccttg
cgccctcgctcgctggatgaatttatcgggcaacaggcggcaagagaaaatatccgcgtc
tttatcgaggcggcaaaaaaacggcaggaatcgctcgatcatgtgcttttctttggcccg
ccgggattggggaaaacaaccttagcccagattattgcccgcgaaatgggcgttggcttt
cgagcgacttcgggccctgttattgtgaaatccggtgatttggctgcgcttttgaccaat
cttgaagatggcgatgtgttgttcattgacgagatccatcgtcttcagccggttgtcgaa
gaagttctttatcccgcgatggaagatcgcgctttggatttgatgataggtgaggggcct
tctgctcgttctgtccgaattgatttacctcattttacccttgtaggggcaacgacccgt
caaggtttgttaagcacgcctttgcgtgatcgtttcgggattccggtgcgtttgcaattc
tatagcattgcagaattgcggcaggtcattacgcgcgctgcccgtttgttgggtatggaa
atcgcgccggaaggtgccgaggaaattgccaaaagatcgcgtggaacacctcgtatcgcc
ggacgtttgctgcgtcgtgtgcgtgattttgccgatgttgctggctctaaaatagttgac
cgctttattgcagatgaggccttgaatcgtctggaagttgataaattggggcttgatctg
atggatcgccgttatctgatgatgattgccgatatttataaaggcgggcctgttggactg
gataccttggcggctggtctatccgagcctcgggatacagttgaagaggtaatcgaacct
tatttgatccagttaggattggtggctcgcacggcgcgcggtcgtcagttaaatggtctg
gcttggcggcatttgggcttaactgaccctagagaagcagaaggaaagcattctgaaata
aaaaatcagcccggattattataa
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