Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: ZCP4_0227
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Entry
ZCP4_0227 CDS
T02932
Name
(GenBank) double-strand break repair protein AddB, alphaproteobacterial type
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
zmi
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Brite
KEGG Orthology (KO) [BR:
zmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmi03400
]
ZCP4_0227
Enzymes [BR:
zmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ZCP4_0227
DNA repair and recombination proteins [BR:
zmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ZCP4_0227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AHB09557
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All DBs
Position
259222..262203
Genome browser
AA seq
993 aa
AA seq
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MLEKSRLFTIPFHRSFADALVEGLIKRYDDPMTLAQGLILLPNNRSIRAITEAFVRQSSS
GLLLPRMVPVGDPLLDDRLGAFLDPVDMIDPLPPAIPPLERHFRLTRLVKKVMQKQGRTI
AVPEAHRLAEELALTLDQLMAAEIAPEQLTQLIDPMAEEELARHWQASLKLLECIITEWP
EELKKTGQIESQERRNRLLDRLADRWQTQPPSEKPIIAAGAITGSPVSARLLRVISEMED
GLVVLPGLDNSMSDEEWQLLGPHERDPDTGIKQPSLESHPQFQLKLLLDRMGVDRKEVIE
WDPPKNYHPDNREQAIRHVMAPARYTDRWRSLPEKERAFPNLSVIETAHPEEEAQVIALA
LREAVEEKGQTAALVTPDRALAIRVSALLKRFGIDADDSAGRPLSLTPPGLLLLDLVSLA
ADHFSAVSFLAIAKHPLVAFGEDRDLWRDHVRSLDMILRGPLLRNGLAGITAKIKEAVDN
QKADPELLAWWEKTKIPFQALDQQFQTVLPLTKIVKILRETANQIAGEKIWAEAAGHLAA
DLIAEIESLAADHNEDMRFSDFAHVLRQLMDKQAVRPMTGGHPRIFIWGLIEARLQHADL
MIAASLNETVWPPIKEADPWLAPRIRSELGLPGLELRIGIAAHDFSSVLGAKKILLTRAR
RDARAPTMPSRFWLRLEAMAANLHHADNLPYWARQLDEPQGFRPVTRPAPNPPVLDRPKR
IAVTRFDSLQSDPYSYYASNILGLRKLDPVDAEPTAAWRGSLIHSILENWVKEDNSRIGK
LKPRALAFLESINAHIIQKTLWLPRLLQAIDWIEDEVQKNAAEGRTILDVEREGRSQING
IELFGFVDRIDRMGDGSLAIVDYKTGTPPSAAAVRHGDMLQLALLGLLIEHNGIKDIKGQ
VSAFEYWSMAQDLKKKTAGYSRSVLGSGKNALLPEDFLNMAEERFIRVTNDYLHNQTPFT
ARPHRGKKLYDDYVQLMRFDEWRSNPQSKSAQN
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaaaatcccgtctctttacgataccttttcatcgttcttttgccgatgccttg
gtcgaaggcctgatcaagcgctatgacgatccaatgacattggcacagggattgatcctg
ctacccaataaccgttccattcgggctataacagaagcctttgtgcgccagtcgtcttcc
ggcctgttattaccccgaatggtgcccgtcggggatcctctcttggatgatcggctgggt
gcttttcttgatccggtggatatgatcgatccgttaccaccggcgatcccgcctttggaa
cggcatttccgattaacccgtcttgttaaaaaggtaatgcaaaaacaggggcggactatt
gccgttcccgaagctcatcgtctggccgaagaattggcactgaccttggatcagttaatg
gcggcagagattgcccctgaacaactgacccagttaatcgaccctatggctgaagaagag
cttgcccgccattggcaggcttctttaaaattgcttgaatgtattattaccgaatggccg
gaagagctaaaaaaaacgggacagattgaaagtcaggaacgccggaaccgactactggat
cgcctcgctgacagatggcaaacacagccacccagtgaaaaaccgattattgccgctggt
gcgattacaggatcgccggtttctgcccgtttgttgcgtgttatctcggaaatggaagat
gggcttgttgttcttcccggccttgataacagcatgtcagacgaagagtggcagttatta
ggccctcatgaacgcgatcccgatacgggcattaaacagccttcgctcgaaagccatccg
caattccagttaaaattattactggacaggatgggtgttgaccggaaagaagtgatagaa
tgggatccgccgaaaaattatcatccagataaccgtgaacaggccattcgtcatgttatg
gctccggcgcgctatactgaccgctggcgtagtcttcctgaaaaagaacgggctttcccc
aatttatccgttattgaaacggcgcatcccgaagaagaagcccaagtcatcgctttggcg
ttaagagaggccgttgaagaaaaaggccagacggcggccttggtaacgcctgatcgggct
ttggccattagggtctctgctctattaaagcgctttggcattgatgccgatgatagtgca
gggcgaccgttatcgcttacccctcccggattattactgcttgatttggtttcgctcgcc
gccgatcatttttcggccgtaagtttcctcgcaatagccaagcatcctttggtcgccttt
ggtgaagaccgtgatctatggcgcgatcatgtccgcagccttgatatgattttacggggg
cctcttttaagaaatggtctggccggaattacggccaaaattaaggaagcggtcgataat
caaaaggctgatcctgaattactggcgtggtgggaaaagactaaaataccctttcaagcg
ctcgatcagcaatttcagacggtgttgccccttactaaaattgttaaaattttgcgggaa
acggcgaaccaaattgccggtgaaaaaatatgggcagaggctgcggggcatttggccgcc
gatttgattgccgaaattgaatctttagcggctgaccataacgaagatatgcgtttttcc
gattttgcgcatgtgctgcggcaattaatggataaacaagcggtcagaccgatgaccggc
ggccatcctcgcatttttatctggggtttgatagaagcccgcttgcaacatgccgattta
atgatcgcagccagtctgaatgaaacggtttggccaccgatcaaggaagccgacccgtgg
cttgcgccccgaattcgttctgaactcggtttgccggggctagaattgcgaattggtatt
gccgcccatgacttctcttcggttttgggggctaaaaaaatattgctgacccgtgccaga
cgcgatgccagagcgccaaccatgccatcgcgtttttggttgcggttggaagccatggcc
gccaacttgcaccatgccgataatctcccctattgggcgcgacagctcgatgaaccacag
ggttttagacctgtcacaaggccagctcctaatccccctgttttagatcgcccaaaacgt
atcgccgttacgcgcttcgatagtctgcaatctgatccttatagctattatgccagcaat
atcttgggcttaagaaaactggatcccgttgatgctgaacccacggcggcgtggcgtggg
agccttattcacagtattcttgaaaattgggttaaggaagataacagccgcatcgggaaa
ttaaaaccgcgagctttggctttcttggaatccattaacgcccatattatccagaaaacg
ctttggttaccgcgattgttacaggcgatagattggattgaagatgaggttcagaaaaat
gcggccgaaggacgcacaatccttgatgtggaaagggaaggtcgctcccagataaacggt
atcgaattatttggctttgttgaccgtatcgatcgcatgggagacggctctctcgccatt
gttgattataaaaccggaacacctccatcggcagccgcggtcagacatggcgatatgttg
cagcttgctcttttggggcttttgatcgaacataacggcataaaagatatcaaagggcag
gtaagcgcctttgaatattggtcaatggcgcaggatctaaaaaagaaaacggcgggctat
tctcgctctgtattgggaagcggtaagaatgctctgttgccagaagattttctgaatatg
gctgaagaacgctttattcgcgttacaaatgactatcttcacaaccaaacgccttttaca
gcacgcccccatcgcggcaaaaaactttatgacgattatgtccaactcatgcgttttgat
gaatggcgcagtaatccccaatccaaatcggcacagaattaa
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