Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: ZCP4_0582
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Entry
ZCP4_0582 CDS
T02932
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
zmi
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Brite
KEGG Orthology (KO) [BR:
zmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zmi03016
]
ZCP4_0582
Enzymes [BR:
zmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ZCP4_0582
Transfer RNA biogenesis [BR:
zmi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ZCP4_0582
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHB09894
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Position
662220..663392
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AA seq
390 aa
AA seq
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MQIHPLITDSATLAALCSRLSRADFIAIDTEFIRENSYWPELCLIQIADDKEAAAIDPLA
PGLDMTPLTDLLVNNEDILKVFHAGGQDLEIILHHTGKMPFPLFDTQIAAMALGVGEQVG
YSNLVERYLSIKLDKGARFTDWSHRPLDRRQLDYAIADVTHLATLFPMLLKELRDKGRGA
WLDQEMERLADPSQYINDPEKSWLRIRMPNRKADILGRLKALAAWREIEAQNRNIPRGRI
AKDETLADLAIHPPRRQSDLVKVRGLSGSWGSNDIGQRLMEAIENAEALRPEEIPQRNDR
KLCIGKDGAMIADLLKLLLKMRARDAEVAARLIAKSDDIEGVIAGERENNPVLTGWRYDI
FGKEAIALIEGKMAFSVQKGKIAMTLIEKE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcatcctcttatcacagatagcgcaacgctagccgctctttgttcccgctta
tcccgggctgactttattgccatagataccgagtttattcgggaaaacagttattggccg
gagttatgcctgattcagatcgcggatgataaagaagccgcggccattgatccactggct
cctggcctggatatgacccctcttactgatttgttggtcaataatgaagatattcttaag
gtttttcatgccggagggcaggatcttgaaattattcttcatcacaccggcaaaatgccc
tttcctctttttgacacacaaattgccgctatggccttgggtgttggtgaacaggtcggc
tattcaaatctggtagaaagatatctttctatcaaattagacaaaggcgcaagatttaca
gattggtcacatcgcccgcttgaccggcggcagttggattacgccattgccgatgtcacc
catcttgcgacccttttccccatgctgttgaaagaattgcgggataaagggcgcggcgca
tggctcgatcaggaaatggaacgactggccgatccttcacaatatatcaatgatcccgaa
aaatcatggcttcgtatccgaatgccgaaccggaaagcggatatcctcggtcgtctcaaa
gccttggccgcatggcgcgaaatcgaggcacaaaaccgtaatattccaaggggtcgtatc
gccaaagatgaaaccttggctgatctggctattcacccccctcgccgacaatccgatctg
gtaaaggttcgcggactttcgggcagctggggcagtaatgacattggccaaaggctgatg
gaagcaatcgaaaatgccgaggctttaagacccgaagaaattccgcaacgcaatgaccga
aaattatgcatcggaaaagacggtgcaatgattgccgatttgctgaaattattgcttaaa
atgcgcgctcgtgatgccgaagttgccgcccgccttatcgcaaaaagcgacgatatcgag
ggagttatcgcgggtgaacgcgaaaataatccggttttgactggctggcgctacgatatt
ttcgggaaagaggccattgccttgattgaaggtaaaatggctttcagcgtccaaaaaggc
aaaatcgccatgaccctgattgaaaaagaataa
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