Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: ZCP4_0661
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Entry
ZCP4_0661 CDS
T02932
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
zmi
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Pathway
zmi02020
Two-component system
zmi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
zmi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ZCP4_0661
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ZCP4_0661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zmi03021
]
ZCP4_0661
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
zmi02035
]
ZCP4_0661
Transcription machinery [BR:
zmi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ZCP4_0661
Bacterial motility proteins [BR:
zmi02035
]
Flagellar system
Flagellar assembly proteins
Stator
ZCP4_0661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
7TMR-HDED
ArAE_1_C
HTH_WhiA
UPF0122
Mt_ATP-synt_B
Motif
Other DBs
NCBI-ProteinID:
AHB09971
LinkDB
All DBs
Position
complement(754003..754746)
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AA seq
247 aa
AA seq
DB search
MHLNDFDASDPSPDIYSRNPSKKNVEALIKTHLQLVRKIAWHVHGRVSSAIEVEDLIQIG
MVALIEAANAFENRGFAFATYASMRIRGAMIDYMRQHAATARSSIARQKTLNKAREELSA
TLGRRPEDAEIAEKLNMSPSEYREWADGAINIRQESLDDVYSDHSSIFTDDNADQASEME
REALQSALAEQIKTLPEREALVLQLYYVEELNLKEIGEVLDLGTARISQIKKSAVDHLRQ
KMTDWQH
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcttaatgattttgacgcttccgatccctcgccagatatctacagccgcaacccg
tcaaaaaagaatgtcgaagcgttaatcaaaacccatcttcaactggttcggaaaattgca
tggcatgtacatggccgtgtttcttctgcgattgaagtggaagacttgatacaaattggc
atggttgctttgatagaggcggctaatgcctttgaaaatcggggttttgcctttgcaacc
tacgcctcgatgcggataaggggcgcgatgattgactatatgcgtcaacatgcggccacg
gcccgttccagtattgctcgccaaaaaaccttgaacaaagcgcgtgaagagttatctgcg
acgcttggtcgccgtcccgaagatgcagaaatagctgaaaagctgaatatgtctcccagc
gaatatcgcgaatgggcggatggagcgatcaatattcggcaagaatctttagacgacgtt
tattccgatcattccagcatattcaccgacgataatgccgatcaagcaagcgagatggaa
cgcgaggcgttgcaatcggctttggctgaacagatcaaaactctgccagagcgggaggcc
ttggttttacagctttattatgtcgaagaattaaacctgaaagaaatcggggaggtgctt
gatctaggcacagccagaattagccaaatcaaaaaatcggcagtcgaccatttgcgccaa
aaaatgacagattggcagcattaa
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