Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: ZCP4_0909
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Entry
ZCP4_0909 CDS
T02932
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
zmi
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Pathway
zmi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ZCP4_0909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmi03400
]
ZCP4_0909
DNA repair and recombination proteins [BR:
zmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ZCP4_0909
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ZCP4_0909
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
SWI2_SNF2
DUF87
AAA_22
Microtub_bd
Kinesin
SRP54
Motif
Other DBs
NCBI-ProteinID:
AHB10209
LinkDB
All DBs
Position
complement(1005744..1007966)
Genome browser
AA seq
740 aa
AA seq
DB search
MTIAIRTTLDEPENHSDFVPHRPSRPEKTEPSKPFRLVSDYEPAGDQPQAISALCKDIQK
GERDQVLLGVTGSGKTFTMAKVIEKLQRPSLILAPNKILAAQLYGEFKRFFPENAVEFFV
SYYDYYQPEAYVPRTDTYIEKDSAINEAIDRMRHAATRSLLEREDVIIVASVSCLYGIGS
VDTYSSMTFRLLKGQLVDQREIIRRLVALQYKRNEVAFGRGSFRVKGDTLEIFPSHYEDM
AWRISFFGDEIEEISEFDPLTGVKIAKLDQIKIYANSHYVTPEPTLKAANNAIRRELDNR
LREFKAEGKLLEAQRLEERTEFDLEMMAATGACSGIENYSRFLTGRAPGEPPPTLFEYLP
DNALLFVDESHQTIPQINGMSRGDYRRKTTLADYGFRLPSCIDNRPLRFEEWNAMRPQTV
YVSATPGPWELEQTGGVFVEQIIRPTGLVDPAIEVRPIEEQVDNLIFEAKKTAAAGWRSL
VTTLTKRMAEDLTEYMYEAGLKVRYMHSDVETIERIELIRDLRLGVYDVLIGINLLREGL
DIPECGLVAVLDADKEGFLRSETSLIQTIGRAARNAEGRVILYGDKITGSMARAMAETER
RRIKQIAWNKAHNITPATVKRQVDDIVGHFGVVNSSEAAATIENHDPKVLARSISETEKE
MLEAAANLEFEKAAQLRDVLHQLKRQELGLPPEKSSEIQGRSEAGRPGTRKTRSDKAREA
KASKRVKQEAGEKLLRSRGH
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgactatcgcgatccgcacgacgcttgatgagccagaaaatcattccgattttgtgcct
catcgccccagccgccctgaaaaaacagagccgtcaaaaccgtttcgtcttgtttccgat
tacgagccagcgggcgatcagccgcaggccattagcgccttgtgtaaagatattcaaaaa
ggcgagcgggatcaggttctgttaggggtaaccggatccggtaagacctttaccatggca
aaagtcattgagaaattacagcgacctagtttgatattggcgcctaataaaattctggct
gcccagctttatggtgagtttaaacgctttttccctgaaaatgcggtcgaatttttcgtg
agctattacgattattatcagccggaagcctatgtgccgaggacggatacctatatcgaa
aaagatagcgccatcaatgaagcgatagaccgaatgcgccatgcggcaacgcgttcttta
ttagagcgtgaagatgttattatcgtggcctcggtttcttgtctttatggtatcggttcg
gttgatacctattcatccatgacctttcgtttattgaaaggtcaattggtcgatcagcgg
gaaattattcgccgtttggtcgctttacagtataagcgcaatgaagttgcctttggacga
ggttctttccgtgtcaaaggcgatacccttgagatattcccatcccattatgaagatatg
gcttggcgtatcagctttttcggggatgaaatcgaagaaatttctgaattcgatcctttg
actggggtaaaaatcgctaaactcgaccagattaaaatttatgctaattctcattatgtg
acaccagaaccgactttgaaggctgctaataatgcgatccggcgcgagttggacaaccgt
ttgcgggaattcaaagctgaaggtaaattactggaagcgcagcgattggaagagcgcacc
gaattcgatctggaaatgatggctgcaaccggtgcttgttccggtattgaaaattattcc
cgctttctgaccggacgcgcccccggagagccaccgcctactttatttgaatatctgcct
gataatgctttgttatttgtggatgaaagtcatcagacgattccgcaaattaacggtatg
tcacggggtgattatcgccgtaagacaactttggctgattatggcttccgcttgccttcc
tgtattgataaccgacctcttcggtttgaagaatggaatgcgatgcgtccgcaaaccgtc
tatgtttccgcaacgccgggaccatgggaattggagcaaactggcggcgtttttgtcgaa
cagattattcgaccgacggggctagttgatcctgcaatcgaagttcgaccgattgaagag
caggttgataatctgatctttgaagccaagaaaacggcagcagctggatggcgttctttg
gtgacgactttgaccaaaagaatggccgaggatttgactgaatatatgtatgaagcgggg
ttgaaagtccgttacatgcattccgatgtcgaaacgatcgaacgcatcgagcttattcgg
gatttgagattaggcgtttatgacgtcttgatcggtatcaacctgttgcgagaaggcttg
gatatcccagaatgtggattagtggccgtattagatgctgataaagaaggctttttgcgg
tctgaaacttcactgattcagacgatcggtcgagctgcgcgtaatgccgaagggcgtgtt
attttgtatggtgacaagataaccggttcgatggcgcgggctatggccgaaaccgaacgc
cgccggatcaagcagattgcctggaataaagcgcataatattacacctgcaacggttaag
cggcaggtcgatgatattgtcggtcatttcggtgttgtcaacagtagtgaggccgccgct
accatcgaaaatcatgatccgaaggttttggcacgttctatttccgagactgaaaaagaa
atgttagaagccgccgctaatttggaatttgaaaaagcggcacaattaagagatgtcttg
caccagttgaaaagacaggaattgggactgcctcctgaaaagtcgtctgagatccaaggt
cggtctgaagccggacgtcccggcactcgaaaaaccagaagtgacaaagctagagaagcc
aaggcttctaagcgcgtcaagcaagaagccggtgaaaaattattgagatcgcgagggcat
tga
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