Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: ZCP4_0959
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Entry
ZCP4_0959 CDS
T02932
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
zmi
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Pathway
zmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ZCP4_0959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmi03400
]
ZCP4_0959
Enzymes [BR:
zmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ZCP4_0959
DNA repair and recombination proteins [BR:
zmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ZCP4_0959
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
AHB10258
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Position
complement(1066519..1068153)
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AA seq
544 aa
AA seq
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MNSFSFDGSDLLAKSDATDNVRAFSVSEISGALKRTVEDAFSHIRVRGEISGFTQAGSGH
CYLALKDDKAVLDSVIWRGVVSRISFRPENGMEVIATGRLTTYAGRSRYQLVIEQLEIAG
QGALMALLDRRRRMLAEEGLFNADRKRALPFMPKIIGVVSSPSGAVIRDILHRLADRCPT
HVILWPVPVQGDQAAAKVAAAVRGFSALKAGDAIPRPNLLIVARGGGSLEDLWPFNEEIL
VRAVAESSIPVISAVGHETDTTLCDYAADLRAPTPTAAAELAVPVRSELVNGLNNLHLRM
NNAIARHAKLSEERLEAVRRRLPDGERLLAPFIQLFDDRASQLERDISERMTHARHKLNF
YAATLRPALLQARIAREQARLSACRLPTGQRLVIQEQQKLDNVTRRLKQAYQQRLSHADL
RFKFLAEKLQPLLLKQRWQQKAELLAACSLKPELVTARLNIWQKNIDQLWRVAEQAHPDK
ILAKGYARVEDSHSHVVSNAHGAKTHKRLNLIFHDGSVWVAPETPPKSRKADNPPEPPEQ
TSFL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaattctttctcttttgatggctctgatctgttagcgaaatctgatgcaacagacaat
gtgcgtgccttttctgtatccgaaatttctggtgctttgaaacggactgttgaagatgct
tttagccatattcgggtaagaggggaaatatccggttttacgcaagcggggtcagggcat
tgctatctagccttgaaggatgacaaagccgttcttgattccgttatctggcgtggtgtg
gtgtcacggatttctttccggcctgaaaatgggatggaagttattgctaccggacggttg
actacctatgccggtcgttcccgttatcaattggttattgaacaattagaaatcgccgga
cagggggctttgatggccttgcttgatcggcggcggcggatgttggcggaagaaggcttg
tttaatgccgatcgcaagcgggctttgcctttcatgcccaaaattatcggggttgtcagt
tcgccttcgggagcggttatccgcgatattttgcatcgtttggctgatcgttgtccgacc
catgtgattttatggccggtgccggttcagggcgatcaggcggcagcaaaagtggcggca
gctgtcagaggtttttcagctttgaaagcgggggatgctatccctaggccgaatttgttg
attgttgcccgtggtggtgggtcgctggaagatctgtggccgtttaatgaagaaatattg
gttcgagctgtcgctgaatcctcgattccagtgatttcggcggtgggtcatgaaaccgat
accaccttatgcgactatgctgctgatttacgcgccccgaccccgacggcggctgctgaa
ttagccgtgccagtcagaagtgagttggtgaatggcctgaataatctccatctgcggatg
aataatgccatagcgcgccatgctaaattatcagaagaaaggctggaagcggttcggcgg
cgtttgccggatggtgaacggctgttagcgccttttatccaattatttgatgatcgagca
tcgcagttggaacgcgacatctccgaacggatgacccatgcccgtcataagctgaatttt
tatgcagctactttgcggcctgccttgttgcaggcaagaattgcccgcgaacaggcgcgg
ttgtcagcttgtcgtttacccactggacagcgtttagtcatacaggaacagcagaaactc
gataatgtgacgcggcgattgaaacaggcctatcaacagcgcttgtcccatgcggattta
cgtttcaaatttttggctgagaagctgcaacccctgttattaaagcagagatggcagcag
aaagccgagttattagcggcttgttctttaaagccagagctggtgactgcgcgtttgaat
atttggcagaagaatattgaccagttatggcgggttgctgagcaagcccatcctgataaa
attctagctaaaggctatgcccgtgtcgaagatagccatagccatgttgtcagcaacgct
catggtgccaaaacgcataagcggttaaatctgattttccatgacggatcggtatgggtc
gcacccgagacacctcctaaaagcaggaaagcagataatccaccggaacccccagagcaa
accagttttttataa
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