Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: ZCP4_1005
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Entry
ZCP4_1005 CDS
T02932
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
zmi
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Brite
KEGG Orthology (KO) [BR:
zmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zmi03032
]
ZCP4_1005
03036 Chromosome and associated proteins [BR:
zmi03036
]
ZCP4_1005
03400 DNA repair and recombination proteins [BR:
zmi03400
]
ZCP4_1005
DNA replication proteins [BR:
zmi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ZCP4_1005
Chromosome and associated proteins [BR:
zmi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ZCP4_1005
DNA repair and recombination proteins [BR:
zmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ZCP4_1005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Peptidase_C23
DUF2267
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHB10304
LinkDB
All DBs
Position
1131692..1131967
Genome browser
AA seq
91 aa
AA seq
DB search
MNSNDLVDRIASGQGLTKTDAKKLVDAVFSTIVDAAVAGEEIALNGFGKFKVKHSAARKG
HNPATLQEIEIPASNRLTFTSAKAVKDRLNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaacgatctggttgaccggattgcctccggtcagggcctcaccaaaacggat
gccaagaagcttgtagatgccgttttttctaccattgttgacgctgctgtcgctggagaa
gaaattgccctgaacggcttcggcaaattcaaggtaaagcatagtgctgcccgtaaaggc
cacaatccggccaccttacaggaaatcgaaattccggcttcaaatcgtctgacctttact
tcagccaaggctgttaaagatcgtttgaacgcctaa
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