Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: ZCP4_1375
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Entry
ZCP4_1375 CDS
T02932
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
zmi
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Brite
KEGG Orthology (KO) [BR:
zmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zmi03032
]
ZCP4_1375
03036 Chromosome and associated proteins [BR:
zmi03036
]
ZCP4_1375
03400 DNA repair and recombination proteins [BR:
zmi03400
]
ZCP4_1375
DNA replication proteins [BR:
zmi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ZCP4_1375
Chromosome and associated proteins [BR:
zmi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ZCP4_1375
DNA repair and recombination proteins [BR:
zmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ZCP4_1375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
AHB10658
LinkDB
All DBs
Position
complement(1543482..1543766)
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AA seq
94 aa
AA seq
DB search
MIRSELIQTLANDNPELSSEEIEHIIDVFFDGITHHLAKGGRVEIRGFGAFSTRFRDARL
GRNPRTGEKVEVEAKRVPYFKPGKEIREHLNIEI
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgattcgttccgaactgatccaaacattagccaatgataatcctgaactttcatcagaa
gaaatagagcatattatagatgttttctttgacgggattacccatcatttggccaaaggt
ggtcgggtagagattcggggttttggtgccttttccacccgttttcgggacgcccgtctg
ggcaggaatcccagaaccggcgaaaaagtcgaggtcgaagccaaacgtgtcccctatttc
aaaccgggaaaagagatacgagaacatcttaatattgaaatttag
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