Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: ZCP4_1682
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Entry
ZCP4_1682 CDS
T02932
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
zmi
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Brite
KEGG Orthology (KO) [BR:
zmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmi03400
]
ZCP4_1682
Enzymes [BR:
zmi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ZCP4_1682
DNA repair and recombination proteins [BR:
zmi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ZCP4_1682
Prokaryotic type
ZCP4_1682
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Beta-prop_IFT140_1st
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
AHB10952
LinkDB
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Position
complement(1902189..1903598)
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AA seq
469 aa
AA seq
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MSDTRPIVIWFRHDFRLRDNAAITAAIQSRNPVICFYIQESADAKTESAADWWVAESLLA
LNQQLKEKGGQLHLFEGDAEKIIPEIVQQSHACKLFWNRRYDFKGKETDQILKKSIRAMG
LEVQSFPNNLLNEPWTVKNDKGQPFRIFSAYWRAVQRHMNIQAVLPCPENWVFSTREIRH
CLGYKDIAILAKETQDSSWKIKLKQSHRFGENEAHERLKSFIENDLAHYAKERDFPAKDG
TSLLSAFLRSGQISSKQIWHEVTKNGSGEGTNKFLAELGWREFAWSVLWEHPDLNQHNLR
PEFDKMPWEKASDNLQRWKKGQTGYPFIDAGMRALWQTGFMPNRLRMVTASFLVKHLLID
WREGEKWFAQTLVDYDPACNATNWQWVAGSGIESAPYFRIMNPILQSQKFDPDGQYIREW
VKELADVSTAFIHTPWKADKQPANYPLPIIAHEEGRDRALRAWKEIRHA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacccgccctattgtgatatggtttcgtcatgattttcgcctgcgtgataat
gcagcgatcactgcggcaattcaaagtcggaatcctgttatctgtttttatatacaggaa
agcgctgacgcaaaaacggaaagcgcagcagattggtgggtagccgaaagccttttagcc
ttgaatcaacaattaaaggaaaaaggagggcaacttcatctttttgagggcgatgctgaa
aaaataatccccgaaattgtgcagcaatctcatgcctgtaagctgttttggaataggcga
tatgatttcaaggggaaagagactgaccaaattttaaagaaatcaattagagctatgggg
ctggaggttcaaagctttcccaataatcttttaaatgagccatggactgtaaaaaacgat
aagggccagcccttccgaatattttctgcctattggcgagctgtgcagcgccatatgaat
attcaggcggttttgccctgtcctgaaaattgggtcttttccacaagagaaattcggcat
tgcttgggctataaagatatagcgatcttagctaaggaaacgcaggattcctcatggaag
attaagttaaagcagagccatcgctttggagagaatgaagctcatgagcggttaaaatca
tttattgaaaatgatctcgcgcattatgccaaagagagggatttccctgccaaagatggg
acatctttactatcagcttttttaagaagcggacagatatcctcaaaacagatatggcat
gaagtcacaaaaaacggttctggtgaagggacgaacaaatttttggcagaattaggttgg
agagaatttgcgtggtcggttttatgggagcatcccgatttaaatcagcataatttgcgc
cctgaatttgataaaatgccctgggaaaaggcttccgacaatttgcaacgttggaaaaaa
ggacagacaggatatcctttcattgatgcgggtatgcgagcgttatggcaaacgggcttc
atgcccaatcggctgcgaatggtgacagcttccttcctcgttaaacatttgttgattgat
tggcgcgagggtgaaaaatggttcgcccaaaccttggttgattatgatccggcctgtaat
gcgacaaactggcaatgggttgcaggaagcggcattgaatctgcgccttatttcaggata
atgaatccgatcttacaatcacaaaaatttgatcctgatgggcaatatattcgtgaatgg
gtcaaggaattagcggatgtatcaactgcttttatccatacgccatggaaagcagataaa
cagcctgccaattatccactgccgattattgcccatgaagaaggtcgagatagagcctta
agagcatggaaagaaatacgtcatgcatag
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