Zygotorulaspora mrakii: HG535_0A04000
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Entry
HG535_0A04000 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03022
Basal transcription factors
zmk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HG535_0A04000
09124 Replication and repair
03420 Nucleotide excision repair
HG535_0A04000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zmk03021
]
HG535_0A04000
03400 DNA repair and recombination proteins [BR:
zmk03400
]
HG535_0A04000
Transcription machinery [BR:
zmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HG535_0A04000
DNA repair and recombination proteins [BR:
zmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HG535_0A04000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
59234096
NCBI-ProteinID:
XP_037142188
UniProt:
A0A7H9AVR3
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Position
1:complement(800688..802502)
Genome browser
AA seq
604 aa
AA seq
DB search
MSHSGAATFKKVSGIITIEEEISPAKLSWRATDGSKSQVITLNTIDRLQATHATSDKMKL
RLIGKVDESKKVKDNEGNEKPADPITFTFIFNNRTVMDNIKVTLQHIISRYKDDEVYEEK
RRKEGDRDVGHTQIPTQLINTNTLDDSLSKIKLLSNLKLQQSLLKESKELMATFKETVIN
AGLPADEFWSTRIPTLRAYALSISQKVGPYNVLSTIKPVASSDNKVNVNISREKILSIFQ
NYPIVKKAYTDNVPKNFKEPEFWARFFSSKLFRKLRGERIMQNDRGDVIIDRYLTLDQEY
DRKDDIALLHPVKKLIDLEGNTQDDPVLKGNKPDFTMQPGVDFNGNSDGTIGILRGMNRL
SEKMIMSLENEYSRSQLQQEDNDLEERDELQFSDLKEAFHEDYAVFNLKNKSAEGSSEAK
DFIKKTKSKEQSIDKARVTQQISLVLDSLSNKLDLSQVAQSNKNNNDINQRVIAAVKINA
KQAKHNNVDSILGSFVGVNAGESEAESKLPPDLLESCRMLHSTCCEFLKHFYLHFHSTES
KKQVMAKKLQKNLKECSEKITELLDDVQKGDGEIMAGLCKTYLHPVMDSITLAIHKFNES
RKKE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcccactctggtgcagctacattcaagaaggtgtctggtatcattacaattgaagaa
gaaatatcgcctgcgaaactgtcatggagagctaccgatgggtcaaaaagtcaggtcata
acactgaacacaatcgatagacttcaagctacgcatgcaacgagtgataaaatgaagctt
cgtttgataggaaaagtcgatgaatcaaaaaaagtcaaagataatgaaggcaatgagaaa
cctgcagatcctattacatttacatttatattcaacaacaggacagtcatggataacatt
aaggtcactttgcagcatatcatctctcggtataaggatgatgaagtatatgaagaaaag
agaaggaaggagggtgatagggatgttggacacacgcagatccctacacagctaatcaac
acaaacacattagatgattcattgtcaaaaataaaactgctgtcaaatttgaaattacag
cagtcgttgttgaaggaaagcaaagagctgatggcaactttcaaagagaccgttataaat
gctggtctgccggcagatgaattctggtcaacaagaattcctacattgagggcatatgcc
ttatcgatatcacaaaaagtgggtccgtataatgttctttctacgatcaagcctgtagcg
tcctcggataataaagtgaatgtgaacatttccagagaaaaaatattgagcatttttcaa
aactatcccattgtcaagaaggcatataccgataatgttcctaaaaatttcaaagaacca
gagttttgggctagattcttctcatcgaagctgttccgtaaacttagaggagaacgtata
atgcaaaacgacagaggtgatgtcattatagataggtatttgacattagatcaagaatat
gataggaaagatgatattgctcttttacatccagttaaaaagcttattgatttggaaggt
aacacacaggatgatccagttctcaaaggaaacaagccagattttacaatgcaacctggt
gttgatttcaatggcaatagtgatggaacgataggtatactaagaggaatgaacagactg
agtgaaaaaatgattatgtcacttgaaaatgagtattcacgatcgcaactgcagcaggaa
gataatgatcttgaagagagagacgaattgcagttttcagatctcaaagaggcttttcat
gaggattatgcggttttcaatttgaagaataaatctgcagaaggttcgtctgaagcaaag
gactttatcaaaaagactaagagcaaggagcaatcaattgataaggcaagagttacacaa
caaatttcacttgtactggacagtttatcaaataaattagatctgtcacaggttgctcaa
tctaacaaaaataataatgatatcaatcagcgcgtgatagcagctgtgaaaatcaacgcc
aaacaagccaagcacaataatgtcgattcgatccttggctctttcgtaggtgttaacgca
ggcgaatccgaggcggaatctaagttaccaccggatctactcgaaagttgtcgaatgtta
catagtacctgctgtgaattcttgaaacatttttatcttcatttccatagcactgaatca
aaaaagcaggtaatggcaaagaaattgcaaaaaaacctaaaagaatgttctgaaaaaatc
accgaattgttggatgatgttcaaaaaggtgacggtgaaataatggcaggcttatgcaag
acatatttacatcctgtcatggattccatcacacttgccatccataaattcaatgagagc
agaaaaaaagaatga
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