KEGG   Zygotorulaspora mrakii: HG535_0A04000
Entry
HG535_0A04000     CDS       T06976                                 
Name
(RefSeq) uncharacterized protein
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
zmk  Zygotorulaspora mrakii
Pathway
zmk03022  Basal transcription factors
zmk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HG535_0A04000
  09124 Replication and repair
   03420 Nucleotide excision repair
    HG535_0A04000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zmk03021]
    HG535_0A04000
   03400 DNA repair and recombination proteins [BR:zmk03400]
    HG535_0A04000
Transcription machinery [BR:zmk03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     HG535_0A04000
DNA repair and recombination proteins [BR:zmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     HG535_0A04000
SSDB
Motif
Pfam: BSD PH_TFIIH
Other DBs
NCBI-GeneID: 59234096
NCBI-ProteinID: XP_037142188
UniProt: A0A7H9AVR3
LinkDB
Position
1:complement(800688..802502)
AA seq 604 aa
MSHSGAATFKKVSGIITIEEEISPAKLSWRATDGSKSQVITLNTIDRLQATHATSDKMKL
RLIGKVDESKKVKDNEGNEKPADPITFTFIFNNRTVMDNIKVTLQHIISRYKDDEVYEEK
RRKEGDRDVGHTQIPTQLINTNTLDDSLSKIKLLSNLKLQQSLLKESKELMATFKETVIN
AGLPADEFWSTRIPTLRAYALSISQKVGPYNVLSTIKPVASSDNKVNVNISREKILSIFQ
NYPIVKKAYTDNVPKNFKEPEFWARFFSSKLFRKLRGERIMQNDRGDVIIDRYLTLDQEY
DRKDDIALLHPVKKLIDLEGNTQDDPVLKGNKPDFTMQPGVDFNGNSDGTIGILRGMNRL
SEKMIMSLENEYSRSQLQQEDNDLEERDELQFSDLKEAFHEDYAVFNLKNKSAEGSSEAK
DFIKKTKSKEQSIDKARVTQQISLVLDSLSNKLDLSQVAQSNKNNNDINQRVIAAVKINA
KQAKHNNVDSILGSFVGVNAGESEAESKLPPDLLESCRMLHSTCCEFLKHFYLHFHSTES
KKQVMAKKLQKNLKECSEKITELLDDVQKGDGEIMAGLCKTYLHPVMDSITLAIHKFNES
RKKE
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgtcccactctggtgcagctacattcaagaaggtgtctggtatcattacaattgaagaa
gaaatatcgcctgcgaaactgtcatggagagctaccgatgggtcaaaaagtcaggtcata
acactgaacacaatcgatagacttcaagctacgcatgcaacgagtgataaaatgaagctt
cgtttgataggaaaagtcgatgaatcaaaaaaagtcaaagataatgaaggcaatgagaaa
cctgcagatcctattacatttacatttatattcaacaacaggacagtcatggataacatt
aaggtcactttgcagcatatcatctctcggtataaggatgatgaagtatatgaagaaaag
agaaggaaggagggtgatagggatgttggacacacgcagatccctacacagctaatcaac
acaaacacattagatgattcattgtcaaaaataaaactgctgtcaaatttgaaattacag
cagtcgttgttgaaggaaagcaaagagctgatggcaactttcaaagagaccgttataaat
gctggtctgccggcagatgaattctggtcaacaagaattcctacattgagggcatatgcc
ttatcgatatcacaaaaagtgggtccgtataatgttctttctacgatcaagcctgtagcg
tcctcggataataaagtgaatgtgaacatttccagagaaaaaatattgagcatttttcaa
aactatcccattgtcaagaaggcatataccgataatgttcctaaaaatttcaaagaacca
gagttttgggctagattcttctcatcgaagctgttccgtaaacttagaggagaacgtata
atgcaaaacgacagaggtgatgtcattatagataggtatttgacattagatcaagaatat
gataggaaagatgatattgctcttttacatccagttaaaaagcttattgatttggaaggt
aacacacaggatgatccagttctcaaaggaaacaagccagattttacaatgcaacctggt
gttgatttcaatggcaatagtgatggaacgataggtatactaagaggaatgaacagactg
agtgaaaaaatgattatgtcacttgaaaatgagtattcacgatcgcaactgcagcaggaa
gataatgatcttgaagagagagacgaattgcagttttcagatctcaaagaggcttttcat
gaggattatgcggttttcaatttgaagaataaatctgcagaaggttcgtctgaagcaaag
gactttatcaaaaagactaagagcaaggagcaatcaattgataaggcaagagttacacaa
caaatttcacttgtactggacagtttatcaaataaattagatctgtcacaggttgctcaa
tctaacaaaaataataatgatatcaatcagcgcgtgatagcagctgtgaaaatcaacgcc
aaacaagccaagcacaataatgtcgattcgatccttggctctttcgtaggtgttaacgca
ggcgaatccgaggcggaatctaagttaccaccggatctactcgaaagttgtcgaatgtta
catagtacctgctgtgaattcttgaaacatttttatcttcatttccatagcactgaatca
aaaaagcaggtaatggcaaagaaattgcaaaaaaacctaaaagaatgttctgaaaaaatc
accgaattgttggatgatgttcaaaaaggtgacggtgaaataatggcaggcttatgcaag
acatatttacatcctgtcatggattccatcacacttgccatccataaattcaatgagagc
agaaaaaaagaatga

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