Zygotorulaspora mrakii: HG535_0B02560
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Entry
HG535_0B02560 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K12601
superkiller protein 8
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG535_0B02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmk03019
]
HG535_0B02560
Messenger RNA biogenesis [BR:
zmk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
HG535_0B02560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Ge1_WD40
BBS2_Mid
NBCH_WD40
Lgl_C
Motif
Other DBs
NCBI-GeneID:
59234878
NCBI-ProteinID:
XP_037142945
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All DBs
Position
2:487467..488744
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AA seq
425 aa
AA seq
DB search
MSNVFISTANCGKAHDADIFGLSVCNPYTVTCSGDGSIKLWKNNLLDNELPRNNYIRQFV
HKTGVHHVEVFHSVERGGNELCIIACVSFSGHIFFYNVDIESGDLNELNLLSPKEDKKSY
WAIKWYKSDDSNICHRFAATDVKGSTYVWRFHPFEEELDEEQAQKEKMKREAKARRNGEY
VPDKDAEIDSTFRSATVRPHLMLDAEIPAQKPAFATCIDISSSGLIATGFSNGNVVISQL
RTLRPIHNFEAFGIQGIEQNSNTVRDVKFSPLGTILAVASDSGSYGCVTMYETEYGERIG
SLTVPTHSNQATIGAFAHSGWVFGLSFNSTGEFLASCGYDSKVRVWDVKSRERVSTLNIT
ASDIEEEQEILLEDEHGDSLKFPPVMAVKFINKGVRKGMGSDTNEGLCCVCMDRSVRWFR
EAGGA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgtatttatctcaacagccaattgtggcaaagctcatgatgctgatatattt
ggattgagtgtgtgcaacccatatacagtaacgtgctctggagacggttcaatcaagctt
tggaaaaataatctactggataacgaattaccgaggaataactatatccgccaatttgtt
cacaagacaggtgttcaccacgtcgaagtctttcattctgtagaaagaggtggaaatgaa
ctctgtatcatagcatgcgtgtcattttcaggtcacattttcttctataacgttgatata
gagtctggagatctgaatgagctcaacttactttctcctaaggaggacaaaaagtcatat
tgggcaattaaatggtacaagagtgatgactcaaatatatgtcaccgctttgctgccaca
gatgtcaaaggctcgacatatgtgtggaggtttcatccatttgaagaagagctggatgaa
gagcaagctcaaaaagaaaaaatgaaaagggaagcaaaagccaggagaaatggagaatat
gtacccgataaagatgctgaaatcgattctacattcagatcggcaactgtacgcccacat
ttaatgctagatgcggaaatccctgcacaaaagccagcatttgcgacttgtattgatatt
tcatcatctggattgatagcgacagggttttccaacggtaacgtggtcatctcacaatta
agaacattacgacccatacacaattttgaagcatttggcatacaaggaattgaacaaaac
agcaataccgtgagggacgtgaaattctcaccattaggaacgatccttgctgtcgctagc
gactcaggctcatacggatgtgtcacaatgtatgagactgagtatggtgaaagaatagga
tctttaaccgttccaacgcacagcaatcaggcaactattggggcatttgcacacagtggt
tgggtatttggcttatcattcaattccacaggtgaatttctggccagttgtggatatgac
agtaaagttagagtttgggacgtaaaatcgagagaacgcgtatcgactttgaatataacc
gcgagcgacattgaggaagaacaagagatactgttagaagacgagcacggggattccttg
aagtttccgcctgtaatggcagttaaatttatcaataaaggtgttcgtaagggaatgggc
agcgatacaaacgaaggattatgctgtgtctgtatggatagaagtgtaagatggtttaga
gaagctggcggcgcataa
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