Zygotorulaspora mrakii: HG535_0B03150
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Entry
HG535_0B03150 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HG535_0B03150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zmk03041
]
HG535_0B03150
03009 Ribosome biogenesis [BR:
zmk03009
]
HG535_0B03150
Enzymes [BR:
zmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HG535_0B03150
Spliceosome [BR:
zmk03041
]
Complex A
U2 snRNP components
U2 related factors
HG535_0B03150
Complex B
HG535_0B03150
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
HG535_0B03150
Ribosome biogenesis [BR:
zmk03009
]
Eukaryotic type
90S particles
Helicases
HG535_0B03150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_23
ResIII
2C_adapt
AAA_7
AAA_30
Motif
Other DBs
NCBI-GeneID:
59234937
NCBI-ProteinID:
XP_037143004
LinkDB
All DBs
Position
2:602189..604519
Genome browser
AA seq
776 aa
AA seq
DB search
MGSKRRFSDKVEHPDPVKSSIPERAAEVAEELAKSHPIPPPTPLQHHDAGEFSELVRHKT
TAEHAAKLENSTVNPFTGRKFTPKYVDILRIRRELPVHAQRAEFLKIYQNNQIMVFVGET
GSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVNLGEEVGYSIRF
ENKTSNKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVVIRR
PDLKLIIMSATLDAEKFQSYFHNAPLLAVPGRTYPVEIYYTPEFQRDYLDSAIRTVLQIH
ATEGEGDILLFLTGEDEIEEASRKISLEGDQLVREEGCGPLAVYPLYGSLPPHMQQRIFE
KAPESHNGRPGRKIVVSTNIAETSLTIDGVVYVVDPGFSKQKVYNPRIRVESLLVSPISK
ASAQQRAGRAGRTRSGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLV
HFDFMDPPAPETMMRALEELNYLACLDDDGNLTALGRLASQFPLDPMLAVMLIGSFEFNC
SQEILTIVAMLSVPNVFIRPSKDKKRSDEAKNIFAHPDGDHLTLLNVYHGFKSDEAYEYG
IHKWCRDHYLNYRALSAADNIRAQLERLMVRYNLELNTTDFDSPRYFDNIRKALASGFFM
QAAKKRSGGKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWL
IELAPAYYDLSNFQKGDVKLSLERIRNRVDTMNQLRESEKHKKKSKHDKHNKHSKH
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaaagagaagattttccgataaggttgaacatcctgatcctgtcaaaagttca
attccggaacgtgctgctgaagtcgccgaggagttagccaaatcacacccaatccctccg
ccaacaccgctacagcatcatgatgctggtgagtttagtgaattggttcgccataaaaca
acagctgaacacgcagcaaaattagagaactcgaccgtgaacccattcacgggtaggaaa
ttcaccccaaaatatgtcgatatactgcgcatcagacgtgaattaccagttcatgcgcaa
agagctgaattcttgaagatctatcagaacaatcaaattatggtttttgtcggtgaaaca
ggttccggtaagactactcagattccacaatttgtgctttttgatgaaatgccacatcta
gaaaacacgcaagttgcctgtacccaaccacgacgtgttgctgcaatgtcagttgctcaa
agagtcgctgaggaaatggatgttaacttgggtgaagaagttggttactccataagattt
gagaataaaacttcgaacaaaactattttgaaatatatgactgacggtatgttgctgagg
gaagctatggaagaccacgatttgaaacgatattcttgtattattctggatgaagctcac
gaacgtacgttagccaccgacatattaatgggtttgttgaagcaagttgtaataaggagg
ccagatttaaaacttattattatgtctgctacgttagatgcggagaagtttcaaagttac
tttcataatgctccattactcgccgttcccggtagaacatatcctgtagaaatttattac
actcctgaatttcaaagagattatttagactctgcaatccgtaccgttttgcaaatccat
gctaccgaaggagaaggtgacatactgctatttttgacaggtgaagatgaaattgaggaa
gcatcaaggaagatatctttggaaggtgatcagttggtaagagaggagggctgtggtcct
ttagctgtctaccccctatatggttctttacccccacatatgcaacaacgtatctttgag
aaagctccggagtcacacaatggtaggccgggcaggaaaattgttgtgtccaccaatatc
gcagaaacttctttaaccattgacggtgtcgtgtatgtcgtagatccaggtttctctaaa
caaaaggtctacaatccaagaatcagagttgaatcgctactggtttcaccaatctcaaag
gcttctgcccagcaaagagcaggtcgtgcaggtcgtacaagatctggtaaatgtttcagg
ttatacactgaagaagcattcaagaaagagctgatagaacagagttatcccgagattcta
cgttcgaatttgtcttcaacggttttggaattgaaaaaactaggcattgatgatttggtg
cactttgatttcatggatcctcctgcaccagagacgatgatgagagctctggaggaattg
aattatttggcatgcttggacgatgacggtaacttaactgctctcggaaggttggcctca
cagtttccactggatccaatgcttgctgttatgcttattggatcgttcgagttcaattgt
tctcaagaaatactaaccatagtcgcaatgctatcagtaccaaacgtattcattcgtccg
tcaaaggacaaaaagcgttcagatgaggcgaagaacatcttcgctcatccagatggtgac
catttgactttactaaacgtgtaccacggatttaaatctgatgaggcctacgagtatggg
attcataagtggtgccgagaccattatttaaattatcgtgcgctctctgctgctgataat
attagagctcaattggaacggttaatggtgcgttataacttagaactgaacacgacagac
ttcgatagcccaagatatttcgataacataagaaaggctcttgcatctgggttctttatg
caggcagccaagaagagatcgggtggcaagggctacatcactgtaaaagataatcaagat
gtcttgatccatcccagcactgtgctaggccacgatgccgaatgggttatttacaatgaa
tttgttttgacgtcgaagaattacataagaaccgtaacatccgtcagaccggaatggtta
attgaactagctcctgcttactacgatttaagcaactttcaaaaaggcgatgtcaagtta
tctctggagaggatcaggaacagagtcgatactatgaatcaattgagggaaagcgaaaaa
cacaagaagaaaagtaaacacgataaacataataaacacagtaagcactaa
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