KEGG   Zygotorulaspora mrakii: HG535_0C06130
Entry
HG535_0C06130     CDS       T06976                                 
Name
(RefSeq) uncharacterized protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
zmk  Zygotorulaspora mrakii
Pathway
zmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HG535_0C06130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zmk03041]
    HG535_0C06130
Spliceosome [BR:zmk03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    HG535_0C06130
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_SPT8 eIF2A Beta-prop_WDR35_TULP_N WD40_like PD40 PAN2_N WDR54
Other DBs
NCBI-GeneID: 59235956
NCBI-ProteinID: XP_037143986
UniProt: A0A7H9B0U1
LinkDB
Position
3:1202443..1203846
AA seq 467 aa
MSKGKRTTYDSLEVRTDESFDGNGVSVEERLRRIDYQQWEKRKLIPTDDEEVRDALRLIK
EPDNVQYEDPFSRRERLSELLFLNKDHMEIFKAHLQQEELQKSTSDDEKEEEEFYTPASN
DLIEARKFLINYTNVRSKERLEREIQNTATSDVSRIINERRGINTRLKKFELAGSQITSS
RPVSQARLSPNDKFIATANWNGGIGILDSYSLDVICSADGVHQGKIGGINWSPDGKMIVS
GAEDGLVRLFIVEQQQIQESSILKGHERRVAGTAFHPSQLYVASASFDMTWRLWDLNTGK
ELLLQEGHGKEVFCVAFQNDGSLLCSAGLDHCGIIWDIRSGKSTMILKGHAKPIYAVDWS
PNGYTVATGAGDGTVKIWDLRKSSEEFTILAHNNVVSSVSFDKEHGNVLVSGGYDKKVNV
FSCDNWIKLNSLEGHTDKVLCSDISKDASFVISSGWDRSIKLWKIDN
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtccaagggaaaaagaactacctacgattctttagaagttcgaactgatgagagtttt
gatgggaatggcgtaagtgtcgaagagcgcttgcgtaggatagattatcaacagtgggag
aagcgtaagctaataccgaccgacgatgaagaagtcagagatgctttgaggctgatcaag
gaacctgataatgtacaatatgaggacccttttagcagaagagagagactgtcagaactg
ctatttttgaataaagatcatatggagattttcaaagctcatctccagcaggaagagctg
cagaaatcaactagtgatgatgaaaaggaagaggaagaattttatactccggcaagtaat
gatttgatagaagcaaggaaattcctgatcaactataccaatgtgcgatccaaggaaaga
ttggaaagagagatacagaacacagcaacgagcgatgtttcaagaataattaatgaaaga
agaggaataaatacaaggctgaaaaaattcgagcttgctggatctcagattacctcatca
cggccggtgtcacaagctagattgtctccgaatgataagtttatcgcgactgcaaactgg
aacggcgggattggcattctagacagttattcattagatgtcatatgttcagccgatgga
gtacatcagggcaaaattgggggaataaattggagtccagatggtaaaatgattgtgagc
ggcgcagaggatggattagtcaggctatttattgtagagcaacaacaaatacaagagtct
tcaatactaaaagggcacgagagacgtgttgctggtactgcttttcatccttctcaatta
tatgtagctagtgcttcattcgatatgacttggaggttgtgggacttaaacacgggtaaa
gaactgttactgcaagaaggacatggcaaagaggtgttttgtgtagcttttcaaaacgat
ggttctcttctttgtagtgcaggattagatcactgcggaatcatatgggacattcgttct
ggaaaatccacgatgattttgaaaggacatgcaaaacctatttatgcggttgattggtct
cctaacggatatacagttgccactggtgctggagatggaaccgtaaaaatatgggatcta
cgtaagtccagtgaagaatttacgattttagcacataacaacgtagtatctagtgtttcc
tttgacaaggagcatggaaatgttctagtttccggtggctacgacaaaaaagtcaatgtt
ttcagttgcgataattggatcaaattgaattccttagagggccatacagacaaagttctt
tgctcagatatttcaaaagatgcgagctttgtaataagttcaggttgggataggtctata
aaattatggaaaatcgataattga

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