Zygotorulaspora mrakii: HG535_0D00340
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Entry
HG535_0D00340 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG535_0D00340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmk03019
]
HG535_0D00340
Messenger RNA biogenesis [BR:
zmk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
HG535_0D00340
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
HG535_0D00340
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
CSL4_N
RRP4_S1
Phage_portal_2
Motif
Other DBs
NCBI-GeneID:
59236051
NCBI-ProteinID:
XP_037144055
UniProt:
A0A7H9B1G9
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Position
4:84197..85069
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AA seq
290 aa
AA seq
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MPEVSRSQFSFELPDTVVPGQLICPECDVCQTDGKNIVYRFVSGHGTMTQTYNKAGTQVA
AISATLVGFVKVQEELRDLSDNDEPQEEVDTMKDAETNVVRVEKVITISVLQNGTKMNIE
SSNNDFANNLPKEGDIVLTRVTRISQQRANVEILAVENAAIPVDSGIGSNGLGVIAAQGG
SGAATFSIAQASSDLGEMFRGIIRSQDVRATERDTVKIINCFKPGDIVRAQVLSLGDGTN
YYLSTARNDLGVVFAKAANGAGGLMYALDWQTMCVPSSGATENRKCAKPF
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagtatcgagatcacagttcagttttgagctaccagatacagttgtcccaggt
caattaatatgtcctgaatgcgatgtttgccaaacggatggcaaaaacatagtgtatcga
tttgttagtggtcatggaacaatgactcaaacatataataaagcaggaacgcaggtcgca
gcgatttccgccactttagttggctttgtaaaagtgcaggaggagttacgcgatctttca
gataatgatgaacctcaagaagaagtggacactatgaaagatgcagaaacaaatgttgtc
agggttgagaaggtcataaccatatctgtgttacagaatggtaccaaaatgaatattgag
tcttcaaataatgatttcgctaataatttaccaaaagagggagatattgtcttaacgagg
gtgacacgaatatcgcagcagagagcgaacgtcgaaatcctagcggttgaaaatgcagcg
attccagtcgatagtggaatagggagcaatggactgggtgtaatagctgcacaaggtgga
tctggagctgcaacattttccattgcacaagcgtcgtctgacttgggtgaaatgtttaga
ggtatcataaggtcacaagacgtacgtgctacggaaagagatactgttaaaataataaac
tgttttaagcctggtgatattgtgagggcacaagtattatcgttaggtgatggaaccaac
tattacttatcgacagcaagaaatgaccttggtgttgtattcgcaaaagcagcgaatgga
gctggcggcttaatgtacgccttagattggcagactatgtgtgttccaagtagtggcgct
acagaaaataggaaatgtgcgaaacctttctaa
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