KEGG   Zygotorulaspora mrakii: HG535_0D01050
Entry
HG535_0D01050     CDS       T06976                                 
Name
(RefSeq) uncharacterized protein
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
zmk  Zygotorulaspora mrakii
Pathway
zmk03013  Nucleocytoplasmic transport
zmk03015  mRNA surveillance pathway
zmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HG535_0D01050
  09122 Translation
   03013 Nucleocytoplasmic transport
    HG535_0D01050
   03015 mRNA surveillance pathway
    HG535_0D01050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zmk03019]
    HG535_0D01050
   03041 Spliceosome [BR:zmk03041]
    HG535_0D01050
Enzymes [BR:zmk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     HG535_0D01050
Messenger RNA biogenesis [BR:zmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     HG535_0D01050
Spliceosome [BR:zmk03041]
 Complex C
  Other components
   EJC/TREX
    HG535_0D01050
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    HG535_0D01050
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 P-loop_SecA
Other DBs
NCBI-GeneID: 59236121
NCBI-ProteinID: XP_037144125
UniProt: A0A7H9B1N7
LinkDB
Position
4:complement(219554..220891)
AA seq 445 aa
MSNEGEEDLLEYSDNEQEIQVDNGAANGEAGDESGATSGAVGDAAAGDSDKKGSYVGIHS
TGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTL
QQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPIGKDAELLKNK
EAAPHIVVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDK
QVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLL
DDLEFNQVIIFVKSTSRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICV
STDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLNK
IQERFDVKIAEFPEEGIDPSTYLNN
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtcaaacgaaggggaggaagatttactggaatactccgacaacgagcaagaaattcaa
gtcgacaatggcgcagcaaatggcgaagcaggcgatgaatcaggtgctacttcaggtgct
gttggagacgctgcagccggggacagtgataaaaagggatcttacgttggtatccattcc
actgggtttaaggatttcctattgaaacctgaattatcgagagccattattgattgcggt
tttgagcatccatctgaagttcaacagcatacaattcctcaatctatccacggtacggat
gttttgtgtcaagcaaagtccggtttaggtaagactgctgtttttgtgctttcaaccttg
caacaattagatccagttccaggtgaagtagcagttgttgttatttgtaacgccagagag
ctagcatatcaaattcgtaatgaatatttgaggttctcaaagtatatgccagatgttaaa
acagcagttttctacggtggtacaccaatcggcaaagatgctgaattattgaaaaataag
gaagccgctccacatattgttgtagcaacacctggtcgtttgaaggctctagttagagat
aaattgattgatttatctcacgtcaagaactttgttatcgatgagtgtgacaaagtcctg
gaggaattagacatgaggagagatgtgcaagatatctttagagcaacaccaagagataaa
caagttatgatgttttcagcaacgctttctcaagaaattagacctatctgtagaagattc
ttacaaaatcctttggaaattttcgtcgatgatgaagcaaaattgacattgcatggtctg
cagcaatattatatcaaattagaagaacgtgaaaagaatcgtaaattagcccaactacta
gatgacttagagttcaaccaagtgattattttcgtcaaatccacttcaagagcaaatgaa
ttaactaaattactaaatgcttcgaatttccctgctattacggttcacggtcacatgaag
caggaggaacgtattgctcgttataaagccttcaaagattttgaaaaacgtatctgtgtg
tccacagatgtcttcggaagaggtattgatatcgaacgtattaatttggctatcaactac
gatttgacaaacgaagcagatcaatacttgcatcgtgtcggaagagctggtagatttggt
accaaaggtctagccatttcatttgtttcttctaaagaagatgaagaagttttaaacaag
attcaggagcgtttcgacgtcaagatagctgagttccctgaggaaggtattgatccttcc
acttatttgaataattaa

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