Zygotorulaspora mrakii: HG535_0D04860
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Entry
HG535_0D04860 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HG535_0D04860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmk03019
]
HG535_0D04860
03041 Spliceosome [BR:
zmk03041
]
HG535_0D04860
Messenger RNA biogenesis [BR:
zmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
HG535_0D04860
Spliceosome [BR:
zmk03041
]
Complex B
Other components
Prp19-related factors
HG535_0D04860
Complex C
HG535_0D04860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
Mad3_BUB1_I
TPR_2
NRDE-2
TPR_8
Tudor-knot
Motif
Other DBs
NCBI-GeneID:
59236500
NCBI-ProteinID:
XP_037144504
UniProt:
A0A7H9B2R0
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All DBs
Position
4:937969..940410
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AA seq
813 aa
AA seq
DB search
MEEYITDSDDIAFEYELQSTPNNKVTWKRYLDSWKSQYNKKKSVNHIVWLYERFCLQFTR
DLEAWEEYIKWVLDSDMFEYHAITNLFKRCLANFSHKCDRICLMFLKFAIAEYDLSVIRV
ALDESLSKISRDSHAKVWGLLLPFICQTMLPLSRIEHVPNEGQYEELLEVVHRCLFKNRT
EIESHAQGDMWSAELLVRYLEVCPKDKIPETLIYLSSTGVNEVVVSSFDRYIGKNENISP
DINLQYQIYTSYLKALKQLRQFNEYKEFSAKVQTIFPHQKFTLIVELVRFYIKEARLKDA
ENLLKSSLADTLTVRDFAAIYDFHIDYEKACAEVILQELDTPGVELRKDLWEPILISHMN
NLETLTKERELKLNDLKLRQNSNVVNTWLERASLFHANNEKCDVFAQAILQIDPSKIITP
GSFGELWCRYAALYWEAGQYENAREVWDRGLRVPYVHMEDLEKIWDCWVNHELELGPHGM
EKAIKLLETALEVPENPDLQLEKYKKGKKKMPSQIIVFSSLCLWNLLLDLVESFCDRNPE
EVGKVINIYEQVIMLKVATPLIFINYAHFLQKYKSTEAGFQVYERAIATFPPETQFEIWN
MYLAEGMDKNAPLSTEHIRDLFDQALETLLPNKIDCKAIFILYSDFEEKNGFANRSVEIL
FQGCKCTEDIESRLSLWKICLSKAKSLLGEGGSRKLYEECIQSMPNSKIIGIVIDFAETE
TRLNEIDRAREIFRYGAQLLPPQKNINLWGSWDEFELQHGDKETYKEMLKLKKNLENEML
VDTESESKFEGNVAFVSASNSKAVNPEEIELDL
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatatataactgatagtgatgatattgcctttgagtatgagttgcagagcacg
ccaaacaataaagtgacttggaaacgatatttggacagctggaagtctcaatataataaa
aagaaatcggtcaatcatattgtctggctttatgagcgattttgcttacaattcactcgt
gatttggaagcatgggaggaatacatcaaatgggtgctcgacagcgacatgtttgagtac
catgcaattaccaacctgtttaaacgatgcttggcgaattttagccataagtgcgatcga
atatgtttgatgttcctaaaatttgcaattgctgaatatgatctttcagtgatcagagtg
gcgcttgatgaaagcttatcgaaaatctcaagggactcgcacgccaaagtttggggatta
cttctcccttttatttgtcagacaatgcttccactgtctagaatagaacatgttcccaac
gagggtcagtatgaggagctgttggaagtggtgcatagatgtctattcaaaaacagaact
gagatcgaaagtcatgcccagggtgatatgtggtcggcagaacttcttgtaagatatcta
gaggtttgccccaaggacaagatacctgaaacgctcatttatttgtcttcaaccggtgtt
aatgaggttgttgtctcttcatttgacaggtatataggaaaaaacgagaacatctccccc
gatatcaatttacagtatcaaatttataccagctatttgaaggcacttaaacaactgcga
cagttcaatgagtacaaagaattttccgctaaggtgcaaactatctttccacatcaaaaa
tttacactgatagtagagttggttaggttttatatcaaggaagcaagattaaaagacgcg
gaaaatctgcttaaatcctctttggcagatacattaaccgttagagattttgctgcaata
tatgacttccatattgactacgagaaagcttgtgctgaagtcatcttgcaggaactggat
acaccgggcgtagagctgcgaaaagatctttgggagcctatactgattagtcatatgaac
aatttagaaactttgaccaaggagcgtgagctcaaactcaatgacctgaagttacggcaa
aattcaaacgtagtaaatacttggctggagagagccagcttattccatgcaaataatgaa
aaatgcgatgtatttgctcaagccattctgcaaatagatccctctaaaataataactccg
ggatcgtttggagagctgtggtgccgatatgctgcactatactgggaagctggtcagtac
gagaatgctagagaggtttgggacaggggtttgcgcgtgccttacgtacatatggaagac
ttagaaaaaatatgggactgctgggtaaaccatgaactggaattaggaccacatggaatg
gagaaagctatcaagttgctggaaacagctctagaagtgcctgaaaatcccgacttacaa
ctcgagaagtacaagaaaggcaaaaaaaagatgccatcccaaataatagtattcagctca
ttgtgcttatggaacttactgctggatcttgtggaatctttttgtgatagaaatcctgaa
gaggttggtaaagtaattaatatttacgagcaggtgatcatgttgaaggtagcaacacct
cttatcttcataaattatgctcatttcctgcaaaaatacaagagcactgaggcgggcttt
caagtttacgaaagggctattgcaaccttccctccggagacgcaattcgaaatatggaac
atgtatcttgcggagggtatggataaaaacgcaccattatccactgagcatatacgtgat
ttgtttgatcaagcattagaaacactgctaccaaataaaattgattgtaaagcgatcttc
attctatacagtgatttcgaagaaaaaaatggttttgccaaccgcagtgttgaaatcttg
tttcaaggctgcaaatgtacagaggatattgagagtagactctcattatggaaaatatgt
ctttctaaagcaaaatcattgctaggcgagggagggtcaaggaaactttacgaggaatgt
atacagtctatgccaaattctaaaattataggtattgttatagattttgcagaaacagaa
acccgtttgaacgaaatagatagggccagagaaatttttagatatggcgcacaattgtta
cccccgcaaaagaatataaatttatgggggagctgggatgagttcgaactgcaacacggt
gataaagagacatacaaggaaatgcttaaactgaaaaagaatttggaaaatgagatgctg
gttgatacagaatctgaaagtaaatttgaaggtaacgttgcgtttgtttcagcctcaaat
agcaaagcagtcaatcctgaagagatagaactggatttatag
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