Zygotorulaspora mrakii: HG535_0E05030
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Entry
HG535_0E05030 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG535_0E05030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmk03019
]
HG535_0E05030
03036 Chromosome and associated proteins [BR:
zmk03036
]
HG535_0E05030
Enzymes [BR:
zmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HG535_0E05030
Messenger RNA biogenesis [BR:
zmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
HG535_0E05030
mRNA degradation factors
5'-3' decay
Decapping complex
HG535_0E05030
Chromosome and associated proteins [BR:
zmk03036
]
Eukaryotic type
Gene silencing
piRNA pathway
HG535_0E05030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Terminase_3
DUF6610
Arcadin_1
Phage_integrase
AAA_30
Motif
Other DBs
NCBI-GeneID:
59237161
NCBI-ProteinID:
XP_037145146
UniProt:
A0A7H9B611
LinkDB
All DBs
Position
5:1050952..1052343
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AA seq
463 aa
AA seq
DB search
MSDDQSWKNELNIPKKDTRPQTEDVLNTKGNSFEDFYLKRELLMGIFEAGFEKPSPIQEE
AIPVAIAGRDILARAKNGTGKTAAFVVPTLEKVKPGVNKIQALIMVPTRELALQTSQVVR
TLGKHCGISCMVTTGGTNLKDDILRLNENVHILVGTPGRVLDLASRKLADLSDCSLFVMD
EADKMLSRDFKTIIEQILIFLPKSHQSLLFSATFPITVKEFMVKHLHKPYEINLMEELTL
KGITQYYAFVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHA
RMRQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSG
RFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATIDKSLYVAEDSSAVPVPFPIQQQ
PNPLQQQLPVQYQIPPQQFPVSGGPQQGMPPQMQPHFTAQPQF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaccaatcttggaagaacgaattaaatattcctaaaaaggatacaagacca
cagactgaagatgtgttgaacacaaaaggtaacagtttcgaagatttctacctcaaacga
gagttactgatgggaatcttcgaagcgggatttgaaaagccctcgccaattcaggaagag
gccataccggtagccatcgcaggaagagatatactagcaagagcaaagaacgggactgga
aaaacggcggcatttgtcgttccgaccttagaaaaggtcaaaccaggtgttaataaaatt
caagcacttatcatggttccaacaagagaattggcattgcaaacatctcaggttgtacgt
actttgggtaaacattgtggtatatcgtgtatggtcaccactggtggtaccaatttaaag
gatgatatcttaagattaaatgaaaacgtgcatatcttagtaggtactccaggtcgagta
ttggatttagcttcaagaaaattagcggacttgagtgactgttctctttttgttatggat
gaagctgataaaatgttatctcgtgatttcaagacaattattgaacaaattctgattttt
ttacccaaaagtcaccaatcattattattcagtgcaacatttccaataactgttaaagaa
ttcatggtcaagcatcttcataaaccttatgagataaatttaatggaagaattaactctg
aagggtattacacaatattacgcgtttgtcgaagaaaaacaaaaattacactgtttaaat
acattattttcaaaattacaaattaatcaagcaattatattttgcaattccacaaatcgt
gttgagcttttagctaaaaaaattacagatctaggttattcatgttattattcgcatgca
aggatgagacaacaggagagaaataaggtctttcatgaatttcgtcaaggtaaagttcgt
actttggtttgctcggatttactcacgcgtggtatcgatattcaagcggttaatgttgtc
attaactttgattttccaaaaactgcggaaacatatttgcatagaattggtagatctggt
agatttggccacttaggtttagcgattaatctgatcaattggaacgatcgattcaatttg
tataagattgaacaggaattgggaactgaaattgccgctattccagcaacaatcgacaaa
tcgttgtatgttgctgaagactcttcggcagttcctgtaccctttccaattcaacaacag
cccaacccgcttcaacagcaattgcctgtacaatatcaaattcctccgcagcagtttcca
gtaagtggaggtcctcagcaaggtatgccacctcagatgcagcctcattttactgctcag
ccacagttttaa
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