KEGG   Zygotorulaspora mrakii: HG535_0E05030
Entry
HG535_0E05030     CDS       T06976                                 
Name
(RefSeq) uncharacterized protein
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
zmk  Zygotorulaspora mrakii
Pathway
zmk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HG535_0E05030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zmk03019]
    HG535_0E05030
   03036 Chromosome and associated proteins [BR:zmk03036]
    HG535_0E05030
Enzymes [BR:zmk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     HG535_0E05030
Messenger RNA biogenesis [BR:zmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     HG535_0E05030
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     HG535_0E05030
Chromosome and associated proteins [BR:zmk03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    HG535_0E05030
SSDB
Motif
Pfam: DEAD Helicase_C Terminase_3 DUF6610 Arcadin_1 Phage_integrase AAA_30
Other DBs
NCBI-GeneID: 59237161
NCBI-ProteinID: XP_037145146
UniProt: A0A7H9B611
LinkDB
Position
5:1050952..1052343
AA seq 463 aa
MSDDQSWKNELNIPKKDTRPQTEDVLNTKGNSFEDFYLKRELLMGIFEAGFEKPSPIQEE
AIPVAIAGRDILARAKNGTGKTAAFVVPTLEKVKPGVNKIQALIMVPTRELALQTSQVVR
TLGKHCGISCMVTTGGTNLKDDILRLNENVHILVGTPGRVLDLASRKLADLSDCSLFVMD
EADKMLSRDFKTIIEQILIFLPKSHQSLLFSATFPITVKEFMVKHLHKPYEINLMEELTL
KGITQYYAFVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHA
RMRQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSG
RFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATIDKSLYVAEDSSAVPVPFPIQQQ
PNPLQQQLPVQYQIPPQQFPVSGGPQQGMPPQMQPHFTAQPQF
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgagcgacgaccaatcttggaagaacgaattaaatattcctaaaaaggatacaagacca
cagactgaagatgtgttgaacacaaaaggtaacagtttcgaagatttctacctcaaacga
gagttactgatgggaatcttcgaagcgggatttgaaaagccctcgccaattcaggaagag
gccataccggtagccatcgcaggaagagatatactagcaagagcaaagaacgggactgga
aaaacggcggcatttgtcgttccgaccttagaaaaggtcaaaccaggtgttaataaaatt
caagcacttatcatggttccaacaagagaattggcattgcaaacatctcaggttgtacgt
actttgggtaaacattgtggtatatcgtgtatggtcaccactggtggtaccaatttaaag
gatgatatcttaagattaaatgaaaacgtgcatatcttagtaggtactccaggtcgagta
ttggatttagcttcaagaaaattagcggacttgagtgactgttctctttttgttatggat
gaagctgataaaatgttatctcgtgatttcaagacaattattgaacaaattctgattttt
ttacccaaaagtcaccaatcattattattcagtgcaacatttccaataactgttaaagaa
ttcatggtcaagcatcttcataaaccttatgagataaatttaatggaagaattaactctg
aagggtattacacaatattacgcgtttgtcgaagaaaaacaaaaattacactgtttaaat
acattattttcaaaattacaaattaatcaagcaattatattttgcaattccacaaatcgt
gttgagcttttagctaaaaaaattacagatctaggttattcatgttattattcgcatgca
aggatgagacaacaggagagaaataaggtctttcatgaatttcgtcaaggtaaagttcgt
actttggtttgctcggatttactcacgcgtggtatcgatattcaagcggttaatgttgtc
attaactttgattttccaaaaactgcggaaacatatttgcatagaattggtagatctggt
agatttggccacttaggtttagcgattaatctgatcaattggaacgatcgattcaatttg
tataagattgaacaggaattgggaactgaaattgccgctattccagcaacaatcgacaaa
tcgttgtatgttgctgaagactcttcggcagttcctgtaccctttccaattcaacaacag
cccaacccgcttcaacagcaattgcctgtacaatatcaaattcctccgcagcagtttcca
gtaagtggaggtcctcagcaaggtatgccacctcagatgcagcctcattttactgctcag
ccacagttttaa

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