Zygotorulaspora mrakii: HG535_0F03820
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Entry
HG535_0F03820 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG535_0F03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zmk03000
]
HG535_0F03820
03019 Messenger RNA biogenesis [BR:
zmk03019
]
HG535_0F03820
04121 Ubiquitin system [BR:
zmk04121
]
HG535_0F03820
Enzymes [BR:
zmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
HG535_0F03820
Transcription factors [BR:
zmk03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
HG535_0F03820
Messenger RNA biogenesis [BR:
zmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HG535_0F03820
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
HG535_0F03820
Ubiquitin system [BR:
zmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
HG535_0F03820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
Baculo_IE-1
RRM_1
Rtf2
zf-RING_2
SET_assoc
zf-C3HC4_3
zf-C3HC4
zf-UDP
zf-RING_UBOX
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
59237630
NCBI-ProteinID:
XP_037145597
UniProt:
A0A7H9B597
LinkDB
All DBs
Position
6:732680..734572
Genome browser
AA seq
630 aa
AA seq
DB search
MTTNPHVHENLKAIQKALSNYDMSFLSDDEEDFCPLCLEPMDITDKNFKPCPCGYQICQF
CYNNIRQNEELNGRCPACRRKYDDESVEYVVLTSEELKMEREKQSRKEWERKQRDKERKE
YENANRKHLAGMRVIQKNLVYVVGINPPVPYEEVAPLLKSDKYFGQYGKISKIVVNKKTP
HSNNDHYHSNATFTGYGVYITFSKKEDAAKCIAQVDGTYMDGRLVKAAYGTTKYCSSYLR
GLTCPNPNCMFLHEPGEEADSFNRRELSNKQQPSQQVTSHQQQQSQSQIQAQAQAQSQAQ
SQTQQATTRTHLASTIYKNTSNTVPTATGNFSGTPSPALIKTQLHHQDHHMNGTGSSTPI
LTPATIPAGSNPWGLSQSANQVSVSKNASTHNLPTLTDALNHQQSNIANNSIHNNQNNNN
NIVSSNAQTEQLANRKKQHSAREKRCIDPYDALSGAVKFLDDRIASLSNYQTRSLSLRPD
LIDDATFNKYPSLFSWDNIEISQESDQILTEKLIDMLAINPVDHTASVVSFFQNANVGAF
PQSIPQQPVPQHSQPQSHLQQQQAQQRPLNVNTPPPPGIFSTQQIPIQMQQQQQQQQQQQ
QQASADNRQSINSTDFLNQLISGRRVAAGN
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaatcctcatgttcatgagaatctaaaggcaattcaaaaggctttgagtaat
tacgatatgtcatttttgtcggatgatgaagaggacttttgtcccctgtgtttggaaccg
atggatataacagataagaatttcaagccctgtccgtgtggataccaaatttgtcagttt
tgctacaataatatcagacaaaacgaagaactaaatggacgttgcccagcatgtcgtcga
aaatacgatgatgaaagcgtcgaatacgttgttttaacttcagaagaactgaaaatggaa
agagagaaacaatcaagaaaggaatgggaaagaaaacagagggataaagaaagaaaagaa
tacgaaaatgcgaacaggaaacatttagcaggtatgagggtgattcaaaaaaatctggtg
tatgtggtcggcattaatccacctgtaccctacgaggaagttgcgccactactaaaatca
gataaatattttggtcaatatggtaagattagtaagatagtggtcaacaagaagactcct
cattccaataatgatcactatcattcaaatgcgactttcacgggttacggtgtttatatc
actttctcaaagaaggaagatgctgcgaagtgcattgctcaggttgatggtacatatatg
gacggtagactagttaaagctgcgtatggcacaaccaagtattgctcttcatatttgagg
ggcttgacctgtcctaatccgaattgtatgtttcttcatgaaccaggtgaagaggctgac
tcatttaatagaagggaattgagcaataagcagcagccttcacagcaggtgacatcacac
caacaacagcaatcacagtcacagatacaagcacaagcacaagcacaatcacaggcacaa
tcgcaaacccaacaggcaacaacgcgaactcatctagcatcaaccatttataagaatact
tcgaatacagtacctactgcaacaggtaacttttcgggaactccatcacctgctttgatt
aagactcaacttcaccatcaagatcatcatatgaatggtaccggttcgtccacaccgatt
ttaactcctgctactataccagcaggatcaaatccttggggattatcacagtctgctaat
caagtttctgtttcgaaaaatgccagcactcataatttaccaactctaacggatgcgcta
aatcatcaacagagcaatattgctaataacagtatccataataaccaaaataataataat
aacattgttagcagtaatgcacaaacggagcagttggccaacaggaagaagcagcattca
gctagggaaaaacgttgtattgacccatacgatgccttgagtggtgctgttaaatttttg
gatgatagaattgcatctctttctaattatcagacacgttctttaagcttgagaccggat
ttgatcgatgatgcgactttcaacaaatacccatcattattttcttgggataatatcgag
atttcccaggaaagtgatcaaattttgaccgaaaaactgatagatatgttagcaatcaat
ccggtagatcatacagcatctgttgtttcattcttccaaaatgcaaatgttggggctttc
ccacagtctattcctcaacaacctgttccccaacattctcaaccacagtcgcatttacaa
cagcaacaagctcaacagcgtcctttaaatgtcaatacacctcctcctcccggtatattt
tctacacagcagatcccaatccaaatgcaacaacagcaacagcaacagcaacagcagcaa
cagcaagcttctgcagataacagacaatcgattaattccaccgattttttaaaccaactg
attagcggtagaagagtcgctgccggaaattaa
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