KEGG   Zygotorulaspora mrakii: HG535_0F03820
Entry
HG535_0F03820     CDS       T06976                                 
Name
(RefSeq) uncharacterized protein
  KO
K10643  CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
Organism
zmk  Zygotorulaspora mrakii
Pathway
zmk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HG535_0F03820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zmk03000]
    HG535_0F03820
   03019 Messenger RNA biogenesis [BR:zmk03019]
    HG535_0F03820
   04121 Ubiquitin system [BR:zmk04121]
    HG535_0F03820
Enzymes [BR:zmk01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     HG535_0F03820
Transcription factors [BR:zmk03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    HG535_0F03820
Messenger RNA biogenesis [BR:zmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     HG535_0F03820
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     HG535_0F03820
Ubiquitin system [BR:zmk04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    HG535_0F03820
SSDB
Motif
Pfam: zf-RING_4 Baculo_IE-1 RRM_1 Rtf2 zf-RING_2 SET_assoc zf-C3HC4_3 zf-C3HC4 zf-UDP zf-RING_UBOX Prok-RING_4
Other DBs
NCBI-GeneID: 59237630
NCBI-ProteinID: XP_037145597
UniProt: A0A7H9B597
LinkDB
Position
6:732680..734572
AA seq 630 aa
MTTNPHVHENLKAIQKALSNYDMSFLSDDEEDFCPLCLEPMDITDKNFKPCPCGYQICQF
CYNNIRQNEELNGRCPACRRKYDDESVEYVVLTSEELKMEREKQSRKEWERKQRDKERKE
YENANRKHLAGMRVIQKNLVYVVGINPPVPYEEVAPLLKSDKYFGQYGKISKIVVNKKTP
HSNNDHYHSNATFTGYGVYITFSKKEDAAKCIAQVDGTYMDGRLVKAAYGTTKYCSSYLR
GLTCPNPNCMFLHEPGEEADSFNRRELSNKQQPSQQVTSHQQQQSQSQIQAQAQAQSQAQ
SQTQQATTRTHLASTIYKNTSNTVPTATGNFSGTPSPALIKTQLHHQDHHMNGTGSSTPI
LTPATIPAGSNPWGLSQSANQVSVSKNASTHNLPTLTDALNHQQSNIANNSIHNNQNNNN
NIVSSNAQTEQLANRKKQHSAREKRCIDPYDALSGAVKFLDDRIASLSNYQTRSLSLRPD
LIDDATFNKYPSLFSWDNIEISQESDQILTEKLIDMLAINPVDHTASVVSFFQNANVGAF
PQSIPQQPVPQHSQPQSHLQQQQAQQRPLNVNTPPPPGIFSTQQIPIQMQQQQQQQQQQQ
QQASADNRQSINSTDFLNQLISGRRVAAGN
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgaccacaaatcctcatgttcatgagaatctaaaggcaattcaaaaggctttgagtaat
tacgatatgtcatttttgtcggatgatgaagaggacttttgtcccctgtgtttggaaccg
atggatataacagataagaatttcaagccctgtccgtgtggataccaaatttgtcagttt
tgctacaataatatcagacaaaacgaagaactaaatggacgttgcccagcatgtcgtcga
aaatacgatgatgaaagcgtcgaatacgttgttttaacttcagaagaactgaaaatggaa
agagagaaacaatcaagaaaggaatgggaaagaaaacagagggataaagaaagaaaagaa
tacgaaaatgcgaacaggaaacatttagcaggtatgagggtgattcaaaaaaatctggtg
tatgtggtcggcattaatccacctgtaccctacgaggaagttgcgccactactaaaatca
gataaatattttggtcaatatggtaagattagtaagatagtggtcaacaagaagactcct
cattccaataatgatcactatcattcaaatgcgactttcacgggttacggtgtttatatc
actttctcaaagaaggaagatgctgcgaagtgcattgctcaggttgatggtacatatatg
gacggtagactagttaaagctgcgtatggcacaaccaagtattgctcttcatatttgagg
ggcttgacctgtcctaatccgaattgtatgtttcttcatgaaccaggtgaagaggctgac
tcatttaatagaagggaattgagcaataagcagcagccttcacagcaggtgacatcacac
caacaacagcaatcacagtcacagatacaagcacaagcacaagcacaatcacaggcacaa
tcgcaaacccaacaggcaacaacgcgaactcatctagcatcaaccatttataagaatact
tcgaatacagtacctactgcaacaggtaacttttcgggaactccatcacctgctttgatt
aagactcaacttcaccatcaagatcatcatatgaatggtaccggttcgtccacaccgatt
ttaactcctgctactataccagcaggatcaaatccttggggattatcacagtctgctaat
caagtttctgtttcgaaaaatgccagcactcataatttaccaactctaacggatgcgcta
aatcatcaacagagcaatattgctaataacagtatccataataaccaaaataataataat
aacattgttagcagtaatgcacaaacggagcagttggccaacaggaagaagcagcattca
gctagggaaaaacgttgtattgacccatacgatgccttgagtggtgctgttaaatttttg
gatgatagaattgcatctctttctaattatcagacacgttctttaagcttgagaccggat
ttgatcgatgatgcgactttcaacaaatacccatcattattttcttgggataatatcgag
atttcccaggaaagtgatcaaattttgaccgaaaaactgatagatatgttagcaatcaat
ccggtagatcatacagcatctgttgtttcattcttccaaaatgcaaatgttggggctttc
ccacagtctattcctcaacaacctgttccccaacattctcaaccacagtcgcatttacaa
cagcaacaagctcaacagcgtcctttaaatgtcaatacacctcctcctcccggtatattt
tctacacagcagatcccaatccaaatgcaacaacagcaacagcaacagcaacagcagcaa
cagcaagcttctgcagataacagacaatcgattaattccaccgattttttaaaccaactg
attagcggtagaagagtcgctgccggaaattaa

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