Zygotorulaspora mrakii: HG535_0F04900
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Entry
HG535_0F04900 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HG535_0F04900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zmk03021
]
HG535_0F04900
03019 Messenger RNA biogenesis [BR:
zmk03019
]
HG535_0F04900
Transcription machinery [BR:
zmk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
HG535_0F04900
Messenger RNA biogenesis [BR:
zmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
HG535_0F04900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pfc11_Rna14-15-ID
Pcf11_C
Pfc11_Clp1_ID
CID
zf_PCFS4
TFIIA
Activator_LAG-3
EIF4E-T
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
59237736
NCBI-ProteinID:
XP_037145703
UniProt:
A0A7H9B5J7
LinkDB
All DBs
Position
6:complement(948864..950720)
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AA seq
618 aa
AA seq
DB search
MEKETALVVKDFTSILEELTFNSRPIITTLTKIAEENIPCAQYFADALEARVERCPPGQK
LYAFYAMDSICKNAGSPYTIYFSRNLFALYKKTYLLVDNNTRTKLINMFKTWMNPNDSTG
GYSPLFEKGALVKIEQFLIKASALHQKNLQTMLPKPTVPLLLREIDKLTSLSNERLKKQP
NDEKLSVKLVVLSQLKQELSRESLTQDALKQLQLQLRQIFAQDQQVLLDIQRQQQYIDVQ
KQQQQQQQQQQQQQQQQQQQQQRHTDAGNNGSFIPIFGGSQIDGSVSSLFGPSSGVLGSP
GFANTGASGQTSSIKNLYESLDTEGLLYKPPRDSIVALYAKIDVDVKDDYNGNQNQKNLP
SLPLLQSIVSDCKAYFATANIDILNTPNLQLSQRAIVNDFPVVNNNLIHLLYRAKPNKCN
ICGKRFGNTSEEKKLMADHLDWHFRISKRLKGSEITSNSLAGNVTATQKNIQARSWYLSD
SQWISLKDEEIIATNRDSNDTKSITVANLDDSNVLPATGNNSDASKQGSSFAIDENVLRK
KYVIVPETSEDMSFQCPICKEKVTGLYDEEIGEWIWKNAIETDKKYFHATCYYEAARNNG
GSTGFQLDLEKLKHLVTD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggagacagctctagtggttaaggattttaccagtattcttgaggagctgacg
tttaattcaagaccgattattacaactcttacgaagatagcggaagaaaatattccatgt
gcacagtattttgcggatgccctggaagccagagtggaacgatgtccgccaggtcaaaaa
ctgtatgcgttttatgctatggactcaatatgcaagaacgcaggtagtccttatacaatc
tatttcagtagaaatctatttgccctgtataagaaaacgtatcttttagtggataacaac
actagaacgaagctgattaacatgttcaaaacatggatgaatccaaacgattccactggt
ggttactctcctctatttgagaaaggtgccctggtcaaaattgagcaattccttattaaa
gcgagcgctctacatcagaagaatctgcagacgatgttaccaaaaccaacggtgccactg
ttacttagagaaattgataagctcaccagtttgagtaatgaaaggctaaagaaacagccg
aacgatgaaaagttaagcgtaaagcttgttgtattatctcagctgaaacaggaattatca
agggaatctttaactcaagacgctttaaagcagcttcagttgcagttgaggcaaattttt
gcacaggatcaacaggtcttgctagatattcaacggcagcagcagtacattgatgttcaa
aagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacagcagcagcagcag
cagcagcgacacacggatgctggtaataacgggtcctttatcccaatatttggcggtagt
cagattgacggttcggtatcatccttgtttggaccctcttccggtgttttggggtctcca
ggatttgcaaatacgggtgcttccggtcaaacgtcgagcattaaaaatctatatgaatca
ctagatacagagggcttactttacaaaccaccaagggattcaatcgtagccctttacgca
aagattgacgtggatgttaaagatgattataatggtaaccaaaatcaaaagaatctgcca
tcattgccacttttacaaagtatagtctctgattgtaaagcttacttcgcaacagctaat
atagatattctaaatactccaaacttacaattatcgcaacgagcgatagtgaatgatttc
ccagtggtaaacaataatttaattcatttattgtaccgtgcaaaaccgaataaatgtaac
atatgcggtaaaagatttggaaatacttcagaagaaaaaaagttaatggctgatcacctg
gattggcattttagaatcagtaaaaggttaaagggttcagaaattacgtcaaattcctta
gctggtaatgtgactgcaacacaaaagaatatacaggcaagaagctggtatttgagtgat
tcccaatggatttctctcaaagatgaagagatcatagctacgaatcgagactctaatgac
actaaatcaattacggttgccaatttagatgattcaaatgtgcttccagccactggaaat
aacagtgacgcttctaagcaaggtagtagctttgctatcgatgagaatgtgctgcgtaag
aaatacgttatcgttccggaaacctcagaagatatgtcgttccaatgccctatatgtaaa
gaaaaagtcacagggttatacgatgaagagatcggagaatggatatggaagaatgcaatc
gaaacagataaaaagtatttccatgcgacttgctattacgaagcagcaaggaataacggc
ggctctactggttttcaactagatttagagaaattgaagcatctggttacagattga
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