Zygotorulaspora mrakii: HG535_0F06020
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Entry
HG535_0F06020 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K09291
nucleoprotein TPR
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HG535_0F06020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmk03019
]
HG535_0F06020
Messenger RNA biogenesis [BR:
zmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HG535_0F06020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ATG16
GIT_CC
ADIP
Motif
Other DBs
NCBI-GeneID:
59237848
NCBI-ProteinID:
XP_037145815
LinkDB
All DBs
Position
6:1158252..1163711
Genome browser
AA seq
1819 aa
AA seq
DB search
MSETDAGGRDGVVDGEVSAFLGLPPQKTETIDPEIVRVIRTKIQEFSQLKSQNMRLTVTI
DEVKSVSTKRNEALRAEVEKALRESDKIRNERDELDKSISELSNERTNLISNLETSKNEV
KEQSEQRDLLKKDKQDIVNLLAEKVEELQGSKNECDRFLKQNKDLRNKIMELESLNQNLQ
FNDLNIKAEVQTLEQRLNLITKNNEWLEEQFNSQSEELVSLRQSFSSKLQASAKELSIVK
NDLQLEQTTKQVIIEKNDELSKNLQEKMLQVKELSDTLATEKGEFQREMSLKQRLIDLLE
KQSTSLKNELKFASERNDSYSSDAGENKSLHNEREKLISDLAELRSKYENSESERLRLEA
LVEEFMPNDEKLELNENSTMLTSYNTDSSTPSRKLYGDLSILRRQLLKEKHQKENLQRQV
ESFIIELEHKIPVINSFKKRTAMLEAELNDVALLLEHTSNEKETKEREFDMVNSKIKQYE
SNIHDLVRQRSDLAHQVQYLLLHISVQNDNNGPLTQDEVAFVKKILNNEDPNYASDSQRV
ISERLLEFDNVIAMQEKNAELLKTVRNLADKLEAEEFARRSDSMTIESKTIKEAKEAIVT
LQSFNEKLESKLKSIEKERDAYKTLVADRKDREMASPSSLKKHDEIEKEESEKKIQTLED
QLTAVTTEYSKNIRMLNEEIQQLYKVKSEITINLEKEKFSRQLAEERLNLSQNSLELTQN
ENRELSRRSKHLQDLMEAQDQRTGKTMDEYIACKTKLGIVESKISNMEAERDLLKSSENR
LKDGYKKLSDEKNTLRIMVTQLQTLQSEREIMLQSIQKDHQEKIKNLESAISKAHESLTS
KDLEINTIKESSQNKSQICEEKIDSLRQEISELREKLTEKTVLVCKLESDVKNTKRELEE
SKARISSFDVLNDTENSEGTQKNIFKDLEKAKIALADAYSQVEHYKELASSSEESLNTVR
AEYTEDRENLATTLENLRKEKDGMEERISSLNKQLQDVSTELKTEKEHSDTEKSELLKKF
SILKANDQPLEEMKKKHELQIEELKKDLEEQASYANKAQKNYEEELKKHEAISKTVSELR
EQVRDYKLSAEHLKSSRDQLSATLEESEKSWLVQKSDLEAQLDANKERLEDLSTQNKLLY
DQVELFSMKAGDQQGVTFTEEHDLLVSLRRERDILETKLAVSDREVKTLRQKQTILENEL
KMARAQAAELKETDAKRQSFTIEHQKIMEQLNQLNLMRESNTTLRNAAQAANKKNDDLRE
ELDNLQKKLIPLQSENASLHDTIQEKDQQIILYKSESNRWRERSQEILQKQERIDPEEYE
KLGNEVSSLKSQLEERIKENTDLNDRFNRLKKQAHEKLNASKNAQTTLTSELNELQEAKK
NLEESLQKETIKCRDLESKLAQTMSSVEFEKLQDDLAKALLRSNEVEESLQDTVNSSNTL
TEHLKNEIASLKNELSILKAKEETTRAAISGQNEDLSNVVESMKQAFEQEKIDFIKTKTE
EFNKQLEMHKSHTPATQNVPQISNIDEEKRKWADEYESAVLQRIQEAEENLKRRIRKPTE
DRINSVIEKKKQELEDEYKKKLFIQDNEIPLSDQQREEIRKELEKDLQNHFENDLKEAKK
KSFEEGKQQASMKTTLLERKISKLETQLKDRENGAELKEAKKPSENDESSDLSTLSKIDE
SAEAGKKPSRPPTSGEQVLKLNNNPTFGFQTTPNSNPFTSSFQNTSFENNSVFGAKPSFG
VAGNGESSPFGKFATGFGSNVQKPTFSLAPTPMVEKPEEAENATEKESSGESNNPSPSKR
PTESEEQTENKRLKEDSTE
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaccgatgcaggtggcagagacggggtggtagatggagaagtgtctgcattc
ttgggactacccccacagaagaccgagacaattgacccagagattgttcgcgtgataaga
acaaaaattcaggaattcagtcagctcaaatcccaaaatatgagactcacagtcactata
gatgaagtcaaatctgtatccacaaagcgaaacgaagctttgagggcagaagtcgaaaag
gcactcagggaaagcgacaaaataagaaacgagagagatgaattggataaatcgatatct
gaattgagcaatgaaaggacgaatttgatcagcaatttagagacttctaagaatgaggtc
aaggagcaatcggaacagagagacttgttgaagaaggataaacaggatatcgttaatctc
ttagcggagaaggtggaggaattgcaaggctccaagaatgaatgcgatagatttttgaaa
caaaataaagatctgcgcaataaaattatggaactagagagtctgaatcaaaatttacaa
ttcaatgatttgaacatcaaggccgaagtccaaacgctagaacaaagattaaatttgatt
acaaaaaacaacgaatggctggaagaacaattcaacagtcaaagcgaggagcttgtttct
ttgagacaatctttcagctctaagctgcaagctagtgcaaaagagctttcaattgttaag
aatgaccttcaattagaacaaacaacgaaacaagttatcatagagaaaaatgatgaatta
tcgaagaatttgcaggagaagatgttacaagttaaagagttaagcgatacgttggccaca
gaaaagggcgaattccaaagagagatgtccttaaaacaacggttgattgacttgttagag
aagcaatcaacgtcattgaaaaatgaacttaaatttgcctcagaaagaaatgattcgtat
tcatcagatgctggtgagaacaaatctttacataatgaaagagaaaaactcatatcggat
ttggcagaattaaggtcaaagtatgaaaattcagagagtgaacgtctacgactggaagca
ttggtcgaagagtttatgccaaatgacgagaaacttgaattaaatgaaaactcaaccatg
ctcacatcatataatacagactcctctacaccgtcgcgcaaactttatggtgatctaagt
atcttgagaagacaattattgaaagaaaagcaccaaaaggagaatttacaacgccaagtg
gaatcatttatcattgaactggagcacaagattccagttatcaattcgtttaaaaagaga
actgcaatgttagaggcagaattaaacgatgttgcattgttgttggagcatacctcaaat
gaaaaggagaccaaggaaagagagtttgatatggtgaattctaagatcaaacagtatgag
tccaatattcatgatttggttagacaacgatctgatctagctcatcaggtgcagtactta
ctattgcacatttcggtgcaaaacgacaacaatggacctttaacacaagacgaggtggct
tttgtaaaaaagattttgaataatgaagatccgaattacgcaagtgactctcagcgtgtc
atttcggagaggttattggagttcgataatgtcattgctatgcaagaaaagaatgcagaa
cttttaaaaaccgtccgaaatttggcagataaattggaagcagaagaattcgctagacgt
tccgatagtatgactatcgaaagtaaaactataaaagaagctaaggaggctatcgttacg
ttacaatcattcaatgaaaagctagaatccaaattgaaaagtatcgaaaaagaaagggac
gcctataaaacactagttgcagatcgtaaggatcgagaaatggccagtccgtcttcttta
aagaagcatgacgaaatcgaaaaagaggaaagcgagaagaaaattcaaactcttgaagat
cagctgacagcagtaacaaccgaatattccaagaatattcgaatgctgaatgaggaaata
cagcaactatacaaagttaagagtgaaatcaccataaacttagaaaaggagaagttttca
aggcaattagctgaagagagactaaacctgtcacagaatagtttagagctgacacagaat
gaaaacagagaactgtcaagaaggtctaaacatctacaggatctcatggaagcacaagat
caaagaacaggcaaaactatggatgagtatattgcctgtaaaactaaactcggtatagta
gagtccaagatatcaaatatggaggcggaaagagaccttctaaagtcttcagaaaatcgc
ctaaaggatggttacaaaaaactatctgatgaaaagaatactcttagaataatggtaaca
caattgcaaacattgcaatcagaacgtgagatcatgttacagagcattcaaaaagaccat
caagagaagatcaaaaatctggaaagtgctattagtaaggctcatgaatccttgacttcc
aaggatttggagatcaatacgataaaagagtcttcccagaataaaagtcaaatatgtgaa
gagaaaatagattctttacggcaggaaattagtgaactgcgagaaaaattgaccgaaaag
acggttttagtgtgtaaactagaatctgatgtcaaaaatacaaagagagaactcgaggaa
agtaaggctcgtatttcttcttttgatgtattaaatgatacggagaatagcgaaggaact
cagaagaatatctttaaagatcttgagaaagctaaaattgcccttgcagacgcgtattct
caggttgaacattataaagagctagcttcttcatcagaggagtccttaaatacagttaga
gcggaatacaccgaagatagagaaaatttggcaacaactttagaaaatttaagaaaagag
aaagatgggatggaagaacgtatttctagcttgaataagcagctacaagacgtaagcaca
gaactgaaaactgagaaggaacactcagatacagaaaaaagtgaactactcaaaaaattt
tcaattttgaaggctaacgatcagccactcgaagaaatgaagaaaaagcacgagcttcag
atagaggagcttaagaaagatctggaggaacaagcgtcatacgcaaataaagctcaaaaa
aattacgaggaggagctaaaaaaacacgaagccatctcgaaaacagttagcgaactaaga
gagcaagttcgagattataaattgtctgcagaacatcttaaatcatcaagagatcaacta
agcgccactctagaggaaagcgaaaaaagttggctggtacaaaagtctgatcttgaggcc
cagttggatgctaacaaagaacgtctcgaagacctttctactcaaaacaaacttttgtat
gatcaggttgaactattctcaatgaaggcaggagatcaacaaggtgttactttcaccgaa
gaacatgatcttttggtcagcctacgtcgcgagagagatattctggaaactaagcttgct
gtcagcgatagagaagttaaaaccctccgtcagaagcaaacaatcttggagaatgagctg
aaaatggcacgtgcccaggcggctgagctcaaggaaacagatgcaaagcgtcaaagtttt
acaattgaacaccagaaaattatggaacaattgaatcagttgaacttgatgagagaaagc
aataccaccttacgaaatgctgcccaggccgcgaacaagaagaatgacgatcttcgtgaa
gagctagacaatctgcagaaaaaattaattccattacaatcggagaatgctagtttgcac
gatacaatacaggagaaagatcaacaaataattctttacaaaagcgagtcaaaccgttgg
agagagcgctctcaggaaattttgcagaagcaggagagaattgatccggaggaatatgaa
aaactaggcaatgaggtgtcttctttgaaatctcaacttgaggagcgaatcaaagagaat
actgacttgaatgacagattcaataggctcaagaaacaggcacatgaaaagctaaatgct
tctaaaaatgctcaaacgacgttgacttcagaactgaacgaattacaggaggctaaaaag
aatctagaagaatccttacaaaaagagactataaaatgtcgtgatctggagtcaaaactt
gctcaaactatgagctctgtcgaatttgagaagttacaggatgatttggccaaagcactt
ctcagatcaaatgaagttgaggagagccttcaagacactgttaactcttcgaatacattg
acagaacatctcaagaacgagattgcctcattgaaaaatgaactctcgattttgaaggcg
aaagaggaaacaactcgtgctgcaatttctggccaaaatgaagacctatcaaatgtagtg
gaatctatgaagcaagcttttgagcaagaaaaaatcgatttcatcaagacaaaaacggag
gaattcaataagcaactcgaaatgcataaaagtcatactccagcaactcaaaatgtacct
caaatcagtaacatcgatgaagaaaagagaaaatgggcagacgaatacgaatctgccgta
ctacaacgaattcaggaggccgaagaaaatttaaaaagacggatcaggaagccaacagag
gatagaatcaatagcgtcattgagaaaaagaagcaagagttagaagatgaatacaaaaag
aagcttttcattcaagataatgaaatcccgctgagtgatcaacaacgggaagaaatacga
aaagagcttgagaaagatttgcaaaatcatttcgaaaatgacttgaaagaagccaaaaag
aagtcttttgaagaaggcaaacagcaagcatcaatgaaaaccacattgttagaaagaaag
atttcaaaacttgagacgcaacttaaagatagagagaatggcgctgaattgaaagaggcc
aaaaagccgtcagaaaacgatgaatcaagtgatctttctacactttcaaagatagacgag
agtgctgaggctgggaaaaaacccagccgaccacccacctcaggcgaacaagttttgaaa
ttaaataataatccaacctttggctttcaaacaacgcctaatagcaatccttttacgtca
tcctttcaaaacactagctttgaaaacaactcagtattcggagctaaaccatccttcggg
gtagcaggcaatggtgagtcatctccattcggtaaatttgcgacaggttttggaagcaat
gttcaaaaaccaacattttctctggcacctacaccgatggtcgagaaacctgaagaagca
gaaaatgcgaccgaaaaagaatcctcgggggaatcaaataatccctccccttcaaaaaga
cccacagaaagtgaggaacagaccgaaaacaagagattgaaggaagattctacagaataa
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