KEGG   Zygotorulaspora mrakii: HG535_0G00670
Entry
HG535_0G00670     CDS       T06976                                 
Name
(RefSeq) uncharacterized protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
zmk  Zygotorulaspora mrakii
Pathway
zmk03018  RNA degradation
zmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HG535_0G00670
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HG535_0G00670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zmk03019]
    HG535_0G00670
   03041 Spliceosome [BR:zmk03041]
    HG535_0G00670
Messenger RNA biogenesis [BR:zmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     HG535_0G00670
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     HG535_0G00670
Spliceosome [BR:zmk03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    HG535_0G00670
SSDB
Motif
Pfam: LSM Hfq ACC_central
Other DBs
NCBI-GeneID: 59237966
NCBI-ProteinID: XP_037145908
UniProt: A0A7H9B6Q1
LinkDB
Position
7:complement(join(110501..110836,110908..110919))
AA seq 115 aa
MSDTIQPQMQPQQQQKKKFEGPKREAILNLAKYKDSKVCVKLMGGRMVTGVLKGYDQIMN
LVLDETMENLRDPEDPSVILKDKTRNLGLIVIRGTVLLSLRPCEGSEMIYIQESE
NT seq 348 nt   +upstreamnt  +downstreamnt
atgagtgataccattcaaccacagatgcaaccacaacagcagcagaaaaagaagtttgag
ggtcccaaaagagaagctattctgaacttagccaagtacaaagatagcaaagtgtgtgtg
aaactcatgggcggtagaatggtaactggcgtgttgaagggctacgaccaaattatgaat
ctggtgcttgatgagaccatggaaaacctgagagatccagaggacccttcagttatactg
aaagacaagacgaggaacctgggtctgatcgtcatcagaggtaccgtacttctctccttg
agaccgtgcgaaggttcggaaatgatatatattcaggaatcagaatga

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