Zygotorulaspora mrakii: HG535_0G00730
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Entry
HG535_0G00730 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K12879
THO complex subunit 2
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03013
Nucleocytoplasmic transport
zmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HG535_0G00730
09122 Translation
03013 Nucleocytoplasmic transport
HG535_0G00730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmk03019
]
HG535_0G00730
03041 Spliceosome [BR:
zmk03041
]
HG535_0G00730
Messenger RNA biogenesis [BR:
zmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
HG535_0G00730
Spliceosome [BR:
zmk03041
]
Complex C
Other components
EJC/TREX
HG535_0G00730
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
HG535_0G00730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
59237972
NCBI-ProteinID:
XP_037145914
LinkDB
All DBs
Position
7:complement(116274..121121)
Genome browser
AA seq
1615 aa
AA seq
DB search
MSQNLSCVLDVLSKKQENLAANRRIFTTDFINQWPVKSQELCSQFSNLENNEGRKKWLKE
VFNELMDILSEQRLPGNLSMPSISKLIDDIILGGSGDLMGQELTSIVGKMFISVLQQSPE
ADDNKVAALARITNSLHRELFKFSRISTKLLNNEQTVLLKHLLKKSKYELKKFNLLAECS
TGYSQLTMLLIAAYNDIDKMQKITYYLKQLYHIVGKYSLDSMRTLDIILQLSSAFITDHY
MFLVKLLKKSDYWPTNCPANNGIYESLNIGGNMIASNIIAFSLSRDGTYSDSKYLDMVCI
LIKYGFVNFVSIWENVGPDNESLERYFVGFEKKLEAESMKNASNPLAMAAALTADEDTES
VSREDGKEIQGEKLIDAAQCDSKEHHSLTQDDSCDVSVISKGKLQLLERLIVHGCTCAAF
YVLKKSPKFVQIHDRIPIYISRIFNYMIEPLYHSKVFSPCGKLKSALLDTRLENGVMSHK
VRLLEEIRSHDPFSHLELRTRSVFYFSEWSEKLDRILSVEQLFKRSHEFLTVLGTYLAKD
PKLITKICRIGIADIKENPESIERWMDYARKFIFPATPTLEINPVVASEIYGLMKLFPFE
KRYFMYNEMLTKLSQDDLPIKFAFNRTEREAKGILKALSVDNIEQESRKLAKLASTNPLA
VLIPTVKQIENYDKVSELVVFSAKYFNDFAYDALQYVLLLRLTNGKTPVQSDGVNQAMWV
QRLAVFIANLTKSCEKMNINNIITYIVKTLHQGNIIAVSLMKELINKVGGIRDLNEVNLK
QLKMLNSGEPLKRIARKLIFDTRDEKNEIATKLLNLFSNQNAVSEVILLLYRLNLKANSH
EAHYKILSSRCDEMNTLLWSFIELVKHCFKRQVFSQNVLPFDILKNDYHVSTPWAFHIWR
DYMEESNAEGSASTDKILDDASFEDVDFSEISKELFITFWKLSLYEVQFDKVLYEERKIS
LEEEKSEAESTRKKNELSNKLKDLLGRCLSHQKTFNENKSFLEIQASAWKNNFSQNGCLP
FFQHCIIPRVLFSPADAMYAAFFLKTFDVPYQLLIFGQFVDSKVLGTLLFCCTRLEAGNI
GIFYRAFLGSLEELRNNDKLDKLQHRELYDMHCKITEQLIETLRNKNYMSIRNGIELMKH
LSFVFPLVDTQIELVCVTLEENLEEEQREDIKLPTNALLGHLKARLKKATRLLDYCELND
TEKKDQNTFQSELDELKQYNTLLANERKQAELRKKFEMNKKQREESQKMNEETQEADSTR
SPIIAIPKGPSADISNKHINESPSPPDIILEVINEVSEYLRNDRIDRVLASVGSEHVIVQ
VGQLLNVPMPIHDLRNSLFEILEKHFLSLSRPGINPDIKRSVGELKNSVEHITRDGIKRN
YEDSSVAEGEKKRKLSRYNSDRAVKTSGQSFEKTNERGTFTKSNRQYTTRPSERDLEKKS
SVSRFSNNSRPATEKSDEPKSKTYYTNRQHRGNYQDKTEEYAQKDRSLKASERKSPSIPL
APSKARAVSFPDGPSSTRGVNKPSDRKPQPGVPYKLKAPQNGNGRRFNDFPQETEERPTK
KIRLDEKRYNPGRKDDKSSRDHEASDGSRYNKSSRNQPLPQGPRASTETNSRYQG
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaatttaagttgtgtacttgatgttctgtctaagaaacaagaaaatttggct
gcaaataggagaatttttactaccgatttcataaatcagtggcctgtcaaaagtcaagag
ctatgttctcaatttagtaacctagaaaataatgaaggaagaaaaaagtggcttaaggaa
gttttcaatgaattgatggatattttaagtgaacagcgcttgccggggaatctttcgatg
cctagcatctcaaaattaatcgacgatatcattttgggcggaagtggagacctaatggga
caagaattgacatcaattgttggaaaaatgttcatatcggtgctacaacaatctcccgag
gctgatgacaacaaagtggcagcgctcgccagaattactaattcattgcatagggaactc
ttcaaattcagtagaatctcaacgaaattgttgaacaatgaacaaactgtattattgaaa
cacctcttaaagaaatccaaatacgagctaaaaaagttcaatttgctggccgaatgttct
acgggatattctcagctgacaatgttactaatagcggcctataatgatatcgacaaaatg
caaaagattacatattatctgaagcaactttatcacattgtcgggaaatattctctagac
tctatgcgaacacttgacattatacttcagctatcaagtgcttttattaccgaccactac
atgtttctggtcaagctgcttaaaaaatcggattactggcctactaactgccctgcaaat
aacggcatctatgagagtttaaatattggtggcaatatgattgcttctaatattattgca
ttttctctttccagggatggtacatacagtgattcaaaatacttagacatggtctgcata
ttgattaaatacggatttgtgaactttgtatcaatttgggaaaacgttggaccagacaat
gaatccttggaaagatactttgtcggattcgaaaaaaagttggaagccgaatctatgaag
aatgcttcaaatcctctggctatggcagcagctctgacggccgatgaagataccgagagc
gtttcaagggaggatgggaaggagatacaaggtgaaaaattaatcgatgctgcgcaatgc
gactcgaaggaacatcactcgttgactcaggatgacagttgcgatgtatctgtaatctct
aaaggaaaactgcaacttcttgaaagacttattgtgcatggatgtacttgtgctgctttt
tatgttctcaaaaaatcaccaaaatttgttcagattcatgaccgcattccaatctacata
tccagaatcttcaattatatgattgaaccactttatcactctaaagttttttcaccttgc
ggaaagctgaaaagtgctttgctggatacaagactagaaaatggtgtaatgtcacacaaa
gttaggctgctagaggaaatcagatcgcacgacccattttcgcatcttgaattacgcact
agatcggttttttatttctctgaatggtcagaaaaattggacaggattctttctgttgaa
cagttattcaaaaggtcacacgagttccttaccgtattgggaacgtacttggcaaaagat
ccaaaattaatcactaagatctgtagaattggtatcgcggatattaaggaaaatccagag
tccatagagagatggatggactacgctagaaaattcatatttccagcaacacccactctt
gaaatcaatcctgttgtggcaagtgaaatttatggtctcatgaagctctttccgttcgaa
aagagatactttatgtacaatgaaatgctaacaaaactatctcaagatgatctgccgatc
aagtttgcttttaacagaaccgaaagagaggcaaagggaattttaaaagcattaagtgtg
gataatatcgagcaggaatcgagaaaacttgcaaaacttgcttccacaaatccgcttgca
gtgttaattccaactgtgaagcagattgagaattatgataaagtttccgaactcgtcgtc
ttctctgccaagtattttaatgattttgcttatgatgctttacaatacgttcttttgtta
cgtctaactaatggaaaaactccagttcaatcagatggagtcaatcaggcaatgtgggtc
cagcgactagccgtatttatcgcaaatttaactaagagctgtgagaagatgaacattaat
aatatcatcacttatattgtcaagaccttgcatcaaggcaatatcattgcagtttcatta
atgaaagaactgatcaataaagtcggcggaatcagagatttgaacgaggtgaatctgaaa
caattaaagatgctgaattcaggtgaaccgcttaaaagaatagctcggaagctaattttc
gatactagagatgaaaaaaatgagattgctacgaaactactaaatcttttctcaaatcaa
aacgcagtatctgaggtcattttgttactctatagattaaatctgaaagcaaattctcat
gaggctcattacaaaatcttatcttccagatgtgacgaaatgaacactttactgtggtca
ttcatagagttggtcaaacattgcttcaagagacaagttttcagtcaaaatgttttacca
ttcgatattctcaagaacgattaccacgtttcaacaccttgggcttttcatatatggaga
gattatatggaggaatctaatgcagaagggagcgcttcgacagacaaaatcctagacgat
gcttctttcgaagatgtggacttttcagaaatttcgaaagagctttttataactttctgg
aagttatcactttacgaagttcagttcgataaggtcctctacgaggaaagaaaaatctct
cttgaggaagaaaaaagcgaggctgaatcgaccagaaagaaaaacgaactttcgaataag
ttaaaagatctcttaggcaggtgcctttctcatcaaaagaccttcaacgaaaacaaaagt
tttcttgaaatacaagcctctgcctggaaaaataacttttctcaaaatggttgtttacca
tttttccagcattgcatcattcccagggtgctcttttctcccgcagatgctatgtatgca
gcctttttcttaaaaacttttgatgttccataccaactgctaatatttggacaattcgtt
gactccaaagttcttggcacccttttattttgctgcacacggttggaagctggaaacatt
ggtatcttttatagggcatttcttggaagcttggaagaattacggaataatgataaattg
gataaactgcagcatcgcgaattgtatgacatgcattgtaagattaccgaacaattgatt
gaaacactgcgcaataaaaactatatgtcgattagaaatggcattgagcttatgaagcat
ttgtcatttgtattcccccttgttgatactcaaatcgaactggtttgtgtaacactagaa
gaaaatttggaagaagaacaaagggaggacattaaacttccgacaaatgcacttctcggc
cacttgaaggcaagattaaagaaggcgacgaggttgcttgactattgtgaactgaatgat
acagaaaagaaagatcagaacacctttcagtcagagttagatgagctgaaacagtataat
actcttttagccaacgagaggaaacaagcagaactcagaaagaagttcgaaatgaacaaa
aaacaaagagaagaatctcaaaaaatgaatgaagaaacacaagaggcagacagtactagg
tccccaataattgccattccaaaagggccatcagctgatatttcaaataaacacataaat
gaatcgccgtcaccaccggatataatattggaagttatcaatgaagtaagtgaatatctc
agaaatgacagaattgatagagtgcttgcctcagtaggaagtgaacatgtaatagttcag
gtggggcagctactcaatgttccaatgccaattcatgatttgcgtaactctctatttgaa
atattggaaaagcattttctctcactgtctcgtcctggtatcaatcccgatattaaacga
agtgttggagagttgaagaatagcgtagaacatatcactcgtgatggaatcaagagaaat
tatgaggattcatctgttgcagaaggagagaaaaagaggaaattaagcagatacaactcc
gatcgagcggtaaaaacaagtggtcaatccttcgaaaaaaccaatgaaagaggaacgttc
actaaatccaatagacaatacactacgaggccctctgagagagatctagaaaaaaagtcc
tctgttagcagattttctaataacagtaggccggctaccgaaaaatcagacgagccaaaa
agtaagacgtattatactaatcgtcagcatcgtggaaactatcaggacaagactgaggaa
tatgcccagaaagacagatctctcaaagcttcagagagaaaatccccttccattcccttg
gctccctcgaaggctcgtgccgtgagtttcccagatgggccgtcatctactagaggcgtg
aataaaccaagtgacagaaaacctcaacccggtgtaccctacaaactcaaagcaccgcaa
aatggtaatggtcgcaggttcaacgactttcctcaggagactgaagaaagaccaacaaag
aagattagattggatgaaaagcgctataaccctggaaggaaagacgacaaatcgtcaaga
gatcacgaggccagcgatgggtcgagatataacaagagttcaaggaatcaaccgcttcct
caaggtccaagggcctcaactgaaacaaacagcagatatcagggatga
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