KEGG   Zygotorulaspora mrakii: HG535_0G02900
Entry
HG535_0G02900     CDS       T06976                                 
Name
(RefSeq) uncharacterized protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
zmk  Zygotorulaspora mrakii
Pathway
zmk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HG535_0G02900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zmk03019]
    HG535_0G02900
Messenger RNA biogenesis [BR:zmk03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     HG535_0G02900
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 59238190
NCBI-ProteinID: XP_037146132
UniProt: A0A7H9B747
LinkDB
Position
7:541778..544021
AA seq 747 aa
MSVDPNDLFHKVVSTVRASTALAAKDVDFCRSLDVDVAASIDSNATEVMEMINGVLTSID
PHSDQLESGKDKLEDSWKDFSNLMDALFEKSDRSLDILTKRHTYTQEAKSLQYLDESQDK
ESSPLVRISKPQLQFERPVDNSESHPFIPLLVEKPHSMKPLSECLRLIPEEDDMPEHYSQ
PYSYEIDHQEYDASVLVKSDPIPSQPWNGTEAIWVDNMESLHDLLLELKKYKEIAVDLEH
HDYRSYYGIVCLMQISTRDKDYLIDTISLREKLKILNEVFADPQIVKIFHGAFMDVIWLQ
RDLGLYVVSLFDTYHASRAVGLPRFSLAYLLEKYSNFKTSKKYQLADWRVRPLPKAMAAY
ARSDTHFLLNIYDQLRNQLIQENKLAGVLFESRKVAKRRFEYAAYRPKIPLASVYSSAEK
ANAWQTLMYQYNIPPEKEMLLKKLYEWRDMISRRDDESSRFVMPNQLLVALVSYAPVDSI
GVVSASNMMSDHVRSNSKEIANLIRKTEELPGSNSIHQSPKFKQSRSNIDIVKVLTITQV
QQKVSQFKTLSESHASKNSIDTAGSSSLLLGDILSKNYAASEYLDGRAIEITDSQLKHRA
LEPLAKLSAFDNATSYTVSVVAKSENSENEKKQPNHITKEDRNATSNETDSKKPEMKENM
DEIVTLKVSKGSGKKFRGNDLSKSSTVDVIDYNKSEKILQKNSGERNKNARKRSFDPYSA
PNNSSGAPKTPKRRKATNRGKSASFKK
NT seq 2244 nt   +upstreamnt  +downstreamnt
atgtcagtcgaccctaatgacttgtttcacaaagttgtgagtactgttagagcttcaaca
gctttagctgcgaaagatgttgatttttgtcgcagtctagacgtcgatgttgctgcttcg
atcgatagcaatgcaacagaggtaatggaaatgatcaatggtgtcctaacttcaatagat
ccgcattctgatcagctagaatcaggcaaggataaattggaagactcatggaaggacttt
agtaatttgatggatgcccttttcgagaaatcagaccgctccttggatattttaaccaaa
cgacatacgtatactcaggaagcaaagagccttcagtatcttgatgaatctcaagacaaa
gagtctagtcctctggtccgtatttcaaagccacaattgcaatttgaaagaccagttgat
aatagtgagtcacatccttttattcctctgctagttgaaaagccgcactcaatgaaaccg
ctttctgaatgcttaagattaattcctgaagaagatgacatgccggagcactattcacag
ccttattcgtacgagattgatcatcaagagtacgatgcctcggttcttgtcaaatctgat
cctataccttcacaaccttggaatggcactgaggccatctgggtggataatatggaatct
ctacatgatctgctattagaattgaaaaaatacaaagaaattgcagttgatttggagcat
catgattatagatcctattacggtatagtatgtttgatgcaaatcagcacccgggataaa
gactatttaatcgatacaatctctctgcgcgaaaagctaaagattttgaatgaagttttt
gcagatcctcaaattgtgaagatttttcatggtgccttcatggacgttatttggttacag
agagatctgggtctttacgttgttagtcttttcgatacatatcatgcatccagggcagta
gggcttccgagattcagcctggcatatctgttggaaaagtactctaatttcaaaacgtct
aaaaaatatcagctggcagattggagggttaggcctcttcctaaggcaatggcagcctac
gctagatctgatactcattttcttctaaatatttacgaccaattgaggaaccagctaatt
caagagaacaaattggcaggtgtactatttgagtctcgaaaagttgctaaaagaagattt
gaatatgcggcttatagacccaaaattccacttgcatctgtgtattcttctgcagaaaag
gcaaatgcttggcaaacattaatgtatcagtataacataccaccagagaaggaaatgtta
cttaaaaagttgtatgagtggagagatatgatctctagaagagatgatgaatcttcaagg
ttcgttatgccaaatcaattactggtcgcacttgtttcttatgcacctgttgattcgatt
ggggttgtttctgcaagtaatatgatgtctgatcatgttcggtccaattctaaagaaatt
gcaaatctaataagaaaaactgaagagttaccgggttccaatagtattcaccaaagccca
aaatttaagcaatctagaagcaatattgatatagtcaaggttttaacaattacccaggtc
cagcagaaagtgtcgcaatttaaaactctctctgagagtcatgcatctaaaaattctatt
gatactgctggaagtagctcacttttgcttggcgatattttatccaaaaattacgctgcc
tctgaatatctggatggaagagctatagaaattacagatagccaattaaaacacagagca
cttgaaccactagcaaaactaagcgcattcgataatgctacctcttatacagtgtcggta
gttgcaaagtcagaaaactccgagaatgagaaaaaacaacccaatcatataacgaaagag
gataggaatgccacctcaaatgaaacagactcaaagaaacctgagatgaaggaaaatatg
gatgagattgtaacattgaaagtttctaaaggtagcgggaagaagtttcgtggcaatgat
ctttctaagagctctactgtagacgtcattgactataacaagagcgaaaaaattcttcag
aaaaacagtggcgaaaggaataaaaatgccaggaaaagaagttttgatccatattcagct
ccgaataattcatctggggcacccaagacaccaaaaagaagaaaggcaaccaatagaggt
aaaagtgcatctttcaaaaaataa

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