Zygotorulaspora mrakii: HG535_0H00620
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Entry
HG535_0H00620 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG535_0H00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmk03019
]
HG535_0H00620
Messenger RNA biogenesis [BR:
zmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HG535_0H00620
mRNA degradation factors
5'-3' decay
Lsm complex
HG535_0H00620
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
59238539
NCBI-ProteinID:
XP_037146462
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Position
8:complement(111736..112278)
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AA seq
180 aa
AA seq
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MPENSIVSEGQVPAVQQPVQPQSQPQSQQSSKKITAGEADLYLDQYNFTTTAAIVGSVDR
KIFVLLRDGKMLFGVLRTFDQYANLILEHSVERIYFTESNQYAEENRGLFMVRGENVVML
GEVDIDKEDKPLASMERIPFSKAAKMKKQNDNIRYKLEVEKGKQLARYGQLYEFHKSDMY
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaacagcatcgtgtcagagggtcaagtgccggcagtgcaacaaccggttcag
cctcaatctcagccgcagtcgcaacaaagctcgaagaaaattactgcaggagaagcagac
ctgtatttggatcaatataacttcacaaccactgctgcgatagtgggttctgtggatcgc
aaaatatttgttcttttgagggatggcaaaatgttgtttggtgtactaaggacgtttgac
caatatgctaacctgatattggaacatagtgtggagagaatatactttaccgagtcgaat
caatacgcggaagaaaaccgtggtctctttatggtacgtggtgagaatgtggtgatgctt
ggagaagtagatatagacaaagaagacaaacccttggcgtcgatggagcgcataccattt
tccaaagccgccaaaatgaaaaagcaaaacgacaacataagatataaattagaagtagaa
aagggtaagcaactagcacgctacggtcaactttacgaatttcacaaatccgatatgtat
taa
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