Zymomonas mobilis subsp. mobilis ATCC 10988: Zmob_0143
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Entry
Zmob_0143 CDS
T01875
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
zmm
Zymomonas mobilis subsp. mobilis ATCC 10988
Pathway
zmm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Zmob_0143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmm03400
]
Zmob_0143
Enzymes [BR:
zmm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Zmob_0143
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Zmob_0143
DNA repair and recombination proteins [BR:
zmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Zmob_0143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AEH61996
UniProt:
A0A0H3FZK1
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All DBs
Position
158975..159787
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AA seq
270 aa
AA seq
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MPELPEVETTIRGLSEVLMGEKIIDVKVRRASLRRPIPSDIQERLIGSTIISLSRRAKYG
IIVNDRDDALIFHLGMSGRWKINPENFEKHDHFVLQTKNNFIVSLYDPRRFGSLDLVKKN
QLLEWSYFRNIGPEPLTGNFNPEYLQKKLFSSSAPIKKILLDQKVVAGIGNIYACEALHQ
AKIHPQRPSKNLNFDEITSLVFSIKNILQKAIAEGGSTLKDYARPNGELGYFSTKFKVYG
KEGEQCECGHTIERYTLGGRSTFLCSSCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttgccagagctaccagaagttgaaactaccattcgtggactatctgaagtcctgatgggt
gaaaaaattatagatgtgaaagtgcgccgggcatctttaagacggccaataccctctgat
attcaagaaaggctaataggatcaactatcatttctcttagtcgacgcgcaaaatatggc
attattgtcaatgatcgggatgatgctttaatttttcatcttgggatgtccggtcgatgg
aaaataaatcctgaaaattttgagaaacacgaccacttcgttcttcaaacaaaaaataat
tttatagtttcactttatgacccgcgtcgctttggctctcttgatttagtaaaaaaaaat
caattgttagaatggtcttattttagaaatatcgggccagaacctttaactgggaatttt
aatccagaatatttacagaagaagttattctcttcttctgctcccataaaaaaaatatta
ttagatcaaaaagtagttgctggcattggtaatatttatgcttgtgaggctttgcaccaa
gccaagatacatcctcaacggcctagcaaaaatttaaattttgatgaaataacttcactt
gttttttctatcaaaaatattttgcaaaaggccatagctgagggcgggtcaaccttaaaa
gactatgcacgacctaatggagagctaggttatttttcgactaaattcaaagtatacggc
aaagaaggtgaacaatgtgaatgtggtcatacgatcgagcgttacaccctaggcggtcgt
tcaacttttttgtgttcttcatgtcaaaaataa
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