Zymomonas mobilis subsp. mobilis NCIMB 11163: Za10_0220
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Entry
Za10_0220 CDS
T01110
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
zmn
Zymomonas mobilis subsp. mobilis NCIMB 11163
Brite
KEGG Orthology (KO) [BR:
zmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmn03400
]
Za10_0220
Enzymes [BR:
zmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Za10_0220
DNA repair and recombination proteins [BR:
zmn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Za10_0220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
NPHP3_N
DEAD
DUF2800
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACV74772
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All DBs
Position
257746..261234
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AA seq
1162 aa
AA seq
DB search
MAHPQRLMPLEAEQLQASDPKGNIWLSASAGTGKTHVLTARVLRLLLNRAAPESILCLTF
TKAGAAEMSERINQRLAKWVIQLNDDELREELQALGARYDRDTLALARTLFARVLDAPGG
LRIQTIHSFCQSLLTAFPVEAGLIPGFQLIEGREEATEAKKTLTRILDHQTPPYHIKDDD
IALLAEKLGEQGAEDYIYQCRFHAFAFNNLGVAIESRVKRALDLPFSDINQALEEACDDD
HFDFALLRQIAEANEKWDTATAHKNLAIIQDFVAASPADRLASLGDFQSLILTQKGELKK
APTGITKKIAPEYEEWMIALSKAIHQIISLKKRHEFSQFAIAALRTGQAYSQAWQQTKKE
SGLVDFNDMIETSVALLRTPGIGEWVRYKLDRTTDHILVDEAQDTNIFQWAIISALAEDF
FSGESAKSVETSRSIFAVGDFKQAIYGFQGTDPQAFVDARDYFNDKSQGSGREILDLSLN
RSFRSTPPILAIVDQMLADIESSCGGIGISQQALQPHQSARSDLGGSVVLWQPISDYQEE
GENTSEETDADDEEQLENGELELAIRLARQIETWLNPKTPLYLPALGRNAAPRDILILVR
NRGRLASLIVGCLHAQKIPVAGLDRLTLTAPLAVSDLLSAIRFVLQPDDDLTLACLLVSP
LIGWDQERLYRLAAKRAKKESLFDRLRKSEAEKETWDVIRGWLSKADFITPYRFLEMLLS
GKGEGRRKLLERLGEEARDPINELLNAALLLESETTPSFQRFLDWFDSGDVEIKRDPSVR
QNTVRIMTVHGAKGLQAPVVILADATRDPHQSNGFRKEIITWPLDEANAPIPMPSNDDIA
YLPSDFGDIINEKKAKGLQEHWRLLYVAATRAEEYLVITGHLGSRAKNIPPKDSWYACAT
RAITAMGIAWQEDAMWQQKAVYHWEGRKKVTDIPKKQPTFPKEAMPSWIKNEIPEEPKPA
YPLRPSDLVKDNTSNPPPDGGSITAAKRGTLLHALFERLPMLPVEEREKAGLRWLETSAG
VKDAALRNSLIKDACDAMSNPVYRDIFSEKALAEAPIAAKVGEHVISGTVDRLWIDRDKK
RVHIVDFKTGRRVPATKEQVSEAYQRQLAAYVVALEKIFPDYAIEASLLYTTAPKLVSFE
QPFLHDYFVQMDKGDIQSENQI
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggctcatccacagcgattaatgcctttggaggcagaacagcttcaggcatccgatcct
aaagggaatatatggctgtcggcttctgctggaacggggaaaacgcatgttctgaccgca
cgggttctccggcttcttttaaatcgtgcagcaccagaaagcatcctttgcctgaccttc
actaaggcaggggctgctgaaatgtcagagcgtatcaatcaacgactggcaaaatgggtc
attcagctaaacgatgacgagttaagagaagaattacaggctttgggggcgcgttacgat
cgggatacgctggctttagcgcgaacgctgtttgcgcgggtgctggatgcgccgggtggc
ttgcggatacaaacgatacacagcttttgccaatccttgctgacagctttcccagtcgag
gcggggcttataccgggattccagctaatcgaagggcgagaagaggcgacagaggccaaa
aagacactgacccgaatactcgatcatcaaacaccaccttatcatatcaaagacgatgat
atcgctttattggctgaaaaactcggagagcagggtgccgaagattatatctatcaatgc
cgtttccatgctttcgctttcaataatttaggagtagcaattgaaagtcgggtaaaacgc
gcgctggatttgcctttttcagacatcaatcaggctttggaagaagcctgcgatgacgat
cattttgattttgcgcttcttcgacagatcgccgaagctaatgaaaaatgggacacagcg
actgcccataaaaatctggccattattcaggattttgttgcggcttctcctgctgacagg
ctggcaagccttggtgatttccaaagcttgatcttaacgcaaaaaggggaattgaaaaaa
gcaccgactggtatcacgaaaaaaatcgcgcctgaatatgaagaatggatgatcgctctt
agcaaggcgattcaccagattatcagcctaaaaaaacgccatgaattttcgcaattcgcg
atagcggcacttcgtactggacaagcctatagtcaggcatggcaacagaccaagaaagaa
tcaggtctggtcgatttcaacgacatgattgaaaccagtgttgccttacttcggacgccg
ggtattggtgaatgggtgcgctataaactggatcggacaacagatcatattctagttgat
gaagcgcaagacaccaatatttttcaatgggctattatctcggctctggccgaagatttc
ttctcgggtgaaagtgcaaaatccgttgaaacctctcgcagtatttttgcggttggtgac
tttaaacaggccatttatggcttccaaggcactgatcctcaggcctttgttgatgctcgt
gattattttaatgacaaatctcagggcagtggacgggagattctcgatctatctttaaac
cgttctttccggtcaactccgcctattctggcaatagtcgatcaaatgctggccgatatt
gaaagcagttgcggcggcattggtattagtcagcaagccctgcaaccccatcaatcagca
aggtctgatctgggcggaagcgttgtcttatggcaaccaatctctgattatcaggaagaa
ggcgaaaatacttcagaagagactgacgcagatgatgaagaacagctcgaaaatggcgaa
ttagaactggccattcgcttggcacgccagatagaaacttggcttaatccgaaaacgcct
ctttatctgcctgctttaggacgaaatgcagcaccaagggatatccttattctggtgcgt
aatcgaggaaggctggcttccttgattgtaggctgtcttcacgcccaaaaaattccggtc
gcgggtctcgaccgcttgacattgaccgcgcccttggctgtctctgatttgttatcggct
attcgctttgtgttacaaccggacgatgatttaaccttggcctgtctgctggtttcgcca
ttgatcggctgggatcaagaacgcctttataggcttgccgccaaaagagcgaaaaaagaa
agtctctttgaccgccttcggaaaagtgaagccgaaaaagaaacatgggatgttattcgg
ggatggctttccaaggccgattttattacgccctatcgctttcttgaaatgctgttgagc
gggaagggtgaaggccgccgaaaattgttggaaaggcttggcgaagaggcgcgcgacccc
attaacgaattgctgaatgccgctttgctgttggaaagcgaaacaaccccgtcttttcag
cgttttctcgactggttcgacagcggagatgtcgaaatcaaacgcgacccatcggtgcga
caaaataccgtccgcatcatgactgtccatggtgcaaaaggcctacaagcccctgtcgtt
atcctcgctgatgccacccgcgatccacatcaatcaaacggcttcagaaaagaaatcatc
acttggccacttgatgaggcaaatgcgccaatcccgatgcctagtaatgacgatatcgct
tatctcccttccgattttggggacatcatcaacgagaagaaggccaaaggtttacaagag
cattggcggcttctctatgtggcggcgacacgtgccgaagaatatctggtcatcactggc
catcttggcagtcgcgcgaaaaacattcctccaaaggatagttggtatgcctgcgcgacc
cgcgctatcacggctatgggtattgcatggcaagaagacgctatgtggcaacagaaagcg
gtttaccattgggaaggccgcaaaaaagttaccgatataccgaagaagcaacctaccttt
cctaaagaggctatgccctcatggatcaaaaatgaaataccggaagaacccaaacccgct
tatccattaagaccttccgatctggtaaaagataatacttctaacccgcctcctgatggc
ggctctatcacggctgcaaagcgagggactctgttacatgctttgtttgaacgccttcct
atgcttcctgttgaagaacgggaaaaggctggacttcgctggcttgagacttccgctggt
gtcaaggatgccgcgttacggaatagcctaataaaagatgcctgcgatgcgatgagtaac
cctgtttatcgcgatatcttttccgaaaaagctttggcggaagccccaattgcggccaaa
gtcggagaacatgttatttcaggaacggttgaccgtctttggatagatagggacaagaaa
cgggttcatatcgttgacttcaaaacaggcagacgggtacctgcaaccaaagaacaggtt
agcgaagcctatcaaaggcagttagccgcttatgttgttgctttggaaaagattttcccc
gattatgctatcgaggcttctttgctttatacgacggctccaaagttggtctctttcgag
caacccttcttgcatgattattttgtccaaatggacaaaggcgatattcagtcagagaat
cagatatag
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