Zymomonas mobilis subsp. mobilis NCIMB 11163: Za10_0946
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Entry
Za10_0946 CDS
T01110
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
zmn
Zymomonas mobilis subsp. mobilis NCIMB 11163
Pathway
zmn02020
Two-component system
zmn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
zmn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Za10_0946
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Za10_0946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zmn03021
]
Za10_0946
Transcription machinery [BR:
zmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Za10_0946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_IclR
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ACV75492
LinkDB
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Position
1089447..1090946
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AA seq
499 aa
AA seq
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MLSPRLDIRQSQSLVMTPQLQQAIRLLALSNLEIESFIAEELNSNPLLEASHNDDNGTEN
HSDSTEDLKSDENNPAEYNDPADSLDADYAQEVFHHDSPADNPSSFSESGLDGSLGLNSI
QLSGYDGLDRELTDRNQESLADHLEHQARLCLTGEKLAIACHLIDLIDEAGYLTEPLSSI
ASHLNITEDETLEVLKVIQGFDPTGVGARNLAECLMLQAEEADRLDPAMRKLITNLEWLS
RGALPRLKKLCQVDDEDFADMIQELRNYNPKPGLKFGSAPIQSVTPDIYIKRMKDGWAIE
LNNATLPKLLVNRAYYSELKAQKTDKAEQKSWLDEKLASANWLVRALDQRARTIIKVTEA
IVQYQEGFFLKGIEQLKPLTLRQVAETINMHESTVSRVTNNKYFSCEQGIFELKYLFSSG
IQSSGSEEGAAAEAVKSHIARFIAQEGAEILSDDKLVELLKAKGFAIARRTVAKYREAIG
LGSSVQRRRQKAISASQKA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttgctaagtccaagactagatatacgacaaagccagtctttggttatgacgccgcaactt
cagcaggcgattcgtcttcttgcgctttccaatcttgaaatcgaaagtttcatcgccgag
gaactcaacagcaacccccttctcgaagccagtcataatgatgataacgggacagaaaat
cactccgattcaaccgaagacctaaaaagcgatgagaacaatccagcagagtataacgat
ccggcggacagccttgatgccgattatgcacaggaagtttttcatcacgatagtccggcc
gataacccaagtagcttttcagaaagcggattggacggcagcctaggcttaaacagtatt
caactctcaggttatgacgggcttgatcgggaattaacggatcgaaatcaggaaagtcta
gccgatcatctggaacatcaggccagattatgcctaacgggtgaaaagctagcgattgcc
tgtcatctgatcgacctgattgacgaagccggatatctgaccgagcctttatcttccatc
gcctcgcatcttaatattacagaagacgaaacgctggaggtcttaaaggtcattcaaggc
tttgacccgaccggtgttggcgctcgcaatctggcagaatgtctgatgcttcaagcggaa
gaagccgacaggcttgatccggcgatgcgaaaactgattaccaatctcgaatggttgtca
cgcggggcattgccccgtttaaaaaagctctgtcaggtcgatgacgaagacttcgccgac
atgattcaggaattacgaaattacaaccctaaaccggggctaaaatttggttccgcaccg
atccagtcggttacaccggatatttatattaaacggatgaaagacggctgggcgatcgaa
ctcaataatgccacacttccgaaattgctggtcaatcgtgcttattattccgaattaaaa
gcccagaaaaccgacaaagcagaacaaaaaagctggctagatgaaaaattggcgagcgct
aactggctggtaagggcattggatcaacgcgcccgcacgattatcaaggtaacagaagcc
attgtccaatatcaggaaggcttttttctaaaaggtatcgaacagcttaaaccgctgacg
ctacggcaggtagccgaaaccatcaacatgcatgaatcaacggtcagtcgggttaccaac
aacaaatatttttcctgcgaacagggaatattcgaattaaaatatctcttctccagcggg
atacaatccagcggttcagaagaaggtgctgcggccgaagccgttaaaagccatattgcc
cgcttcatcgctcaagaaggcgcagaaatcctatccgatgacaagctggttgaacttcta
aaagccaaaggcttcgccatcgcccgccgaacagtcgccaaatatcgagaagctatcggc
ctaggctcctcggtgcaacgccgccgccaaaaagcgatcagcgcttcacaaaaagcctaa
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