Zymomonas mobilis subsp. mobilis ZM4: ZMO0278
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Entry
ZMO0278 CDS
T00221
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
zmo
Zymomonas mobilis subsp. mobilis ZM4
Brite
KEGG Orthology (KO) [BR:
zmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zmo03016
]
ZMO0278
Enzymes [BR:
zmo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ZMO0278
Transfer RNA biogenesis [BR:
zmo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ZMO0278
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AAV88902
UniProt:
Q5NQV2
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All DBs
Position
complement(281722..282351)
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AA seq
209 aa
AA seq
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MPLAMTVYFHEEDLPKDALSEGAVAVDTETMGLITHRDRLCVVQISDGKGDQHLVRFAPD
SDYSAPNLKAVLSDPNRLKIYHFGRFDIAAILYYLGVMAAPVYCTKIASKLVRTYTDRHG
LKELVRELLGQDISKQQQCSDWGGEKLSDAQREYAASDVRFLHGLKEKLDIRLKREKREE
LAQACFDFLPTRAKLDIAGWSETDIFAHM
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttgccatgactgtttattttcacgaagaagatttacccaaagatgcgctttct
gagggggctgtagccgttgataccgaaacaatgggactaattacccatcgtgatcggctg
tgtgttgttcaaatttctgacggtaaaggcgatcaacatctggtgcgattcgcaccggat
agcgattacagcgcgcccaatttgaaagcggtgctgtccgacccgaatcgactcaagatt
tatcactttggccgcttcgatattgcagcgattctctattatcttggggtcatggcggca
cctgtctattgcaccaagatcgcctcaaaactcgtcagaacctataccgaccgccatggt
ctgaaagaactagttcgcgaattgctgggacaagacatctcgaaacaacagcaatgctct
gactggggcggggaaaaattatccgatgcacagcgggaatatgcggcttctgatgttcgc
ttcttgcatggcttgaaagaaaaactggatatccgtcttaaacgtgaaaaacgggaagaa
ttggcacaggcttgctttgactttctcccgacgcgcgccaaattggatatcgcgggttgg
tctgaaaccgatattttcgcccatatgtaa
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