Zymomonas mobilis subsp. mobilis ZM4: ZMO0300
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Entry
ZMO0300 CDS
T00221
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
zmo
Zymomonas mobilis subsp. mobilis ZM4
Pathway
zmo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ZMO0300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmo03400
]
ZMO0300
Enzymes [BR:
zmo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ZMO0300
DNA repair and recombination proteins [BR:
zmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ZMO0300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
AAV88924
UniProt:
Q9FDL4
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Position
302313..303947
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AA seq
544 aa
AA seq
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MNSFSFDGSDLLAKSDATDNVRAFSVSEISGALKRTVEDAFSHIRVRGEISGFTQAGSGH
CYLALKDDKAVLDSVIWRGVVSRISFRPENGMEVIATGRLTTYAGRSRYQLVIEQLEIAG
QGALMALLDRRRRMLAEEGLFNADRKRALPFMPKIIGVVSSPSGAVIRDILHRLADRCPT
HVILWPVPVQGDQAAAKVAAAVRGFSALKAGDAIPRPDLLIVARGGGSLEDLWPFNEEIL
VRAVAESSIPVISAVGHETDTTLCDYAADLRAPTPTAAAELAVPVRSELVNGLNNLHLRM
NNAIARHAKLSEERLEAVRRRLPDGERLLAPFIQLFDDRASQLERDISERMTHARHKLNF
YAATLRPALLQARIAREQARLSACRLPTGQRLVIQEQQKLDNVTRRLKQAYQQRLSHADL
RFKFLAEKLQPLLLEQRWQQKAELLAACSLKPELVTARLNIWQKNIDQLWRVAEQAHPDK
ILAKGYARVEDSHSHVVSNAHDAKTHKRLNLIFHDGSVWVAPETPPKSRKADNPPEPPEQ
TSFL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaattctttctcttttgatggctctgatctgttagcgaaatctgatgcaacagacaat
gtgcgtgccttttctgtatccgaaatttctggtgctttgaaacggactgttgaagatgct
tttagccatattcgggtaagaggggaaatatccggttttacgcaagcggggtcagggcat
tgctatctagccttgaaggatgacaaagccgttcttgattccgttatctggcgtggtgtg
gtgtcacggatttctttccggcctgaaaatgggatggaagttattgctaccggacggttg
actacctatgccggtcgttcccgttatcaattggttattgaacaattagaaatcgccgga
cagggggctttgatggccttgcttgatcggcggcggcggatgttggcggaagaaggctta
tttaatgccgatcgcaagcgggctttgcctttcatgcccaaaattatcggggttgtcagt
tcgccttcgggagcggttatccgcgatattttgcatcgtttggctgatcgttgtccgacc
catgtgattttatggccggtgccggttcagggcgatcaggcggcagcaaaagtggcggca
gctgtcagaggtttttcagctttgaaagcgggggatgctatcccaaggccggatttgttg
attgttgcccgtggtggtgggtcgctggaagatctgtggccgtttaatgaagaaatattg
gttcgagctgtcgctgaatcctcgattccggtgatttcggcggtgggtcatgaaaccgat
accaccttatgcgactatgctgctgatttacgcgccccgaccccgacggctgctgctgaa
ttagccgtgccagtcagaagtgagttggtgaatggcctgaataatctccatctgcggatg
aataatgccatagcgcgccatgctaaattatcagaagaaaggctggaagcggttcggcgg
cgtttgccggatggtgaacggctgttagcgccttttatccaattatttgacgatcgagca
tcgcagttggaacgcgatatctccgaacggatgacccatgcccgtcataagctgaatttt
tatgcagctactttgcggcctgccttgttgcaggcaagaattgcccgcgaacaggcgcgg
ttgtcagcttgtcgtttacccactgggcagcgtttagtcatacaggaacagcaaaaactc
gataatgtgacgcggcgattgaagcaggcctatcaacagcgcttgtcccatgcggattta
cgtttcaaatttttggctgagaagctgcaacccctgttattagagcagagatggcagcag
aaagccgagttattagccgcttgttctttaaagccagagctggtgactgcgcgtttgaat
atttggcaaaagaatattgaccagttatggcgggttgctgagcaagcccatcctgataaa
attctagctaaaggctatgcccgtgtcgaagatagccatagccatgttgttagcaacgcc
catgatgccaaaacgcataagcggttaaatctgattttccatgacggatcggtatgggtc
gcacccgagacacctcccaaaagcaggaaagcagataatccaccggaacccccagagcaa
accagttttttataa
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