Zymomonas mobilis subsp. mobilis ZM4: ZMO0362
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Entry
ZMO0362 CDS
T00221
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
zmo
Zymomonas mobilis subsp. mobilis ZM4
Pathway
zmo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ZMO0362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmo03400
]
ZMO0362
DNA repair and recombination proteins [BR:
zmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ZMO0362
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ZMO0362
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
SWI2_SNF2
DUF87
AAA_22
Microtub_bd
Kinesin
SRP54
Motif
Other DBs
NCBI-ProteinID:
AAV88986
UniProt:
Q56998
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All DBs
Position
362511..364733
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AA seq
740 aa
AA seq
DB search
MTIAIRTTLDEPENHSDFVPHRPSRPEKTEPSKPFRLVSDYEPAGDQPQAISALCKDIQK
GERDQVLLGVTGSGKTFTMAKVIEKLQRPSLILAPNKILAAQLYGEFKRFFPENAVEFFV
SYYDYYQPEAYVPRTDTYIEKDSAINEAIDRMRHAATRSLLEREDVIIVASVSCLYGIGS
VDTYSSMTFRLLKGQLVDQREIIRRLVALQYKRNEVAFGRGSFRVKGDTLEIFPSHYEDM
AWRISFFGDEIEEISEFDPLTGVKIAKLDQIKIYANSHYVTPEPTLKAANNAIRRELDNR
LREFKAEGKLLEAQRLEERTEFDLEMMAATGACSGIENYSRFLTGRAPGEPPPTLFEYLP
DNALLFVDESHQTIPQINGMSRGDYRRKTTLADYGFRLPSCIDNRPLRFEEWNAMRPQTV
YVSATPGPWELEQTGGVFVEQIIRPTGLVDPAIEVRPIEEQVDNLIFEAKKTAAAGWRSL
VTTLTKRMAEDLTEYMYEAGLKVRYMHSDVETIERIELIRDLRLGVYDVLIGINLLREGL
DIPECGLVAVLDADKEGFLRSETSLIQTIGRAARNAEGRVILYGDKITGSMARAMAETER
RRIKQIAWNKAHNITPATVKRQVDDIVGHFGVVNSSEAAATIENHDPKVLARSISETEKE
MLEAAANLEFEKAAQLRDVLHQLKRQELGLPPEKSSEIQGRSEAGRPGTRKTRSDKAREA
KASKRVKQEAGEKLLRSRGH
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgactatcgcgatccgcacgacgcttgatgagccagaaaatcattccgattttgtgcct
catcgccccagccgtcctgaaaaaacagagccgtcaaaaccgtttcgtcttgtttccgat
tacgagccggcgggcgatcagccgcaggctattagcgccttgtgtaaagatattcaaaaa
ggcgagcgggatcaggttctgttaggggtaaccggatccggtaagacctttaccatggca
aaagtcattgagaaattacagcgacctagtttgatattggcgcctaataaaattctggct
gcccagctttatggtgagtttaaacgcttttttcctgaaaatgcggtcgaatttttcgtg
agctattacgattattatcagccggaagcctatgtgccgaggacagatacctatatcgaa
aaagatagcgccatcaatgaagcgatagaccggatgcgccatgcggcaacgcgttcttta
ttagagcgtgaagatgttattatcgtggcctcggtttcttgtctttatggtatcggttcg
gttgatacctattcatccatgacctttcgtttattgaaaggtcaattagtcgatcagcgg
gaaattattcgccgtttggttgctttacagtataagcgcaatgaggttgcctttggacga
ggttctttccgtgtcaaaggcgatacccttgagatattcccatcccattatgaagatatg
gcttggcgtatcagctttttcggggatgaaatcgaagaaatttctgaattcgatcctttg
actggggtaaaaatcgctaaactcgaccagattaaaatttatgctaattctcattatgtg
acaccagaaccgactttgaaggctgctaataatgcgatccggcgcgagttggacaaccgt
ttgcgggaattcaaagctgaaggtaaattactggaagcgcagcgattggaagagcgcacc
gaattcgatctggaaatgatggctgcaaccggtgcttgttccggtattgaaaattattcc
cgctttctgaccggacgcgcccccggagagccaccgcctactttatttgaatatctgcct
gataatgctttgttatttgtggatgaaagtcatcagacgattccgcaaattaacggtatg
tcacggggtgattatcgccgtaaaacgactttggctgattatggcttccgcttgccttcc
tgtattgataaccgacctcttcggtttgaagaatggaatgcgatgcgtccgcaaaccgtc
tatgtttccgcaacgccgggaccatgggaattggagcaaactggcggcgtttttgtcgaa
cagattattcgaccgacggggctagttgatcctgcaatcgaagttcgaccgattgaagag
caggttgataatctgatctttgaagccaagaaaacggcagcagctggatggcgttctttg
gtgacgactttgaccaaaagaatggctgaggatttgactgaatatatgtatgaagcgggg
ttgaaagtccgttacatgcattctgatgtcgaaacgatcgaacgcatcgagcttattcgg
gatttgagattgggcgtttatgacgtcttgatcggtatcaacctgttgcgagaaggcttg
gatatcccagaatgtggattagtggctgtattagatgctgataaagaaggctttttgcgg
tctgaaacttcactgattcagacgatcggtcgagctgcgcgtaatgccgaagggcgtgtt
attttgtatggtgacaagataaccggttcgatggcgcgggctatggccgaaaccgagcgc
cgccggatcaagcagattgcctggaataaagcgcataatattacacctgcaacggttaag
cggcaggtcgatgatattgtcggtcatttcggtgttgtcaacagtagtgaggccgccgct
accatcgaaaatcatgatccgaaggttttggcacgttctatttccgagactgaaaaagag
atgttagaagccgccgctaatttggaatttgaaaaagcggcacaattaagagatgtcttg
caccagttgaaaagacaggaattgggactgcctcctgaaaagtcgtctgagatccaaggt
cggtctgaagccggacgtcccggcactcgaaaaaccagaagtgacaaagctagagaagcc
aaggcttctaagcgcgtcaagcaagaagccggtgaaaaattattgagatcgcgagggcat
tga
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