Zymomonas mobilis subsp. mobilis ZM4: ZMO0541
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Entry
ZMO0541 CDS
T00221
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
zmo
Zymomonas mobilis subsp. mobilis ZM4
Pathway
zmo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zmo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ZMO0541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zmo03021
]
ZMO0541
03400 DNA repair and recombination proteins [BR:
zmo03400
]
ZMO0541
Enzymes [BR:
zmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ZMO0541
Transcription machinery [BR:
zmo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ZMO0541
DNA repair and recombination proteins [BR:
zmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ZMO0541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
AAV89165
UniProt:
Q5NQ40
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All DBs
Position
531331..532392
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AA seq
353 aa
AA seq
DB search
MAVNAKNWQELKKPNALEKKASGNGKCKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITAIKIENVLHEFSSLNGVREDVTDIVLNIKQVAIKMQGDGSRRLHISRTGPGVVTAGDI
AVSGDIEVMNPELVICHLDQGAVFNAELTVDTGKGYVAAVANRPADAPIGLIPVDALYSP
VRQVAYKVENARVGQELDYDKLLLTIETDGTISPEDAIAYSARILQDQLQLFVHFDDGLA
PPTSAIGQSSLPSSSSEAENSANQLNRNLLKKVDELELSVRSANCLKNDNIIYIGDLVQK
TEAEMLRTPNFGRKSLNEIKEVLSGMGLRLGMEIPGWPPENIEEMAKKLEQEY
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtcaacgctaagaactggcaggaacttaaaaagcccaacgccctggaaaagaaa
gcgagcgggaacggcaaatgcaaggcaacttttgttgccgagccattagagcgcggcttt
ggtctgacgcttggtaatgcactgcgccgtgtgctgttatcttcactgcaaggggcagcc
attacggctatcaagatcgaaaatgtgttgcatgaattctcgtccctgaatggggttcgt
gaagatgtgaccgatatcgttcttaatatcaagcaggtcgcgattaaaatgcagggagac
ggtagccgtcgccttcatatttctcgtaccggcccaggtgtggttactgccggcgatatt
gctgttagcggtgatatcgaggtgatgaatccagaattagtgatctgtcatcttgatcag
ggtgccgtctttaatgctgaattgaccgttgataccggcaaaggctatgttgccgctgtg
gctaaccgtccggcagatgcacctattggtcttattccagttgatgcgctttattctccg
gtaagacaggttgcatataaagtcgaaaatgcccgcgttggtcaggaactcgattacgac
aagcttttgttgacgatcgaaaccgatggtaccatttcgccggaagatgcgattgcttat
tcagcccgtatccttcaggatcaacttcagctctttgtccactttgatgacggtctggct
ccgccaacctctgctattggacagagttcgctgccttcttccagcagcgaagctgaaaat
agtgctaatcagcttaatcgtaaccttctcaagaaggttgacgaattagaactctctgtt
cgttctgctaactgtctcaagaatgacaatatcatttacatcggtgatcttgttcagaag
actgaagcggaaatgctgcgcaccccgaattttggccgtaaatccttgaatgaaatcaag
gaagtgctgtccggtatgggattgcgtctgggtatggaaatccctggttggccgcctgaa
aatattgaggaaatggccaaaaagctcgaacaggaatattga
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