Zymomonas mobilis subsp. mobilis ZM4: ZMO0549
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Entry
ZMO0549 CDS
T00221
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
zmo
Zymomonas mobilis subsp. mobilis ZM4
Pathway
zmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ZMO0549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmo03019
]
ZMO0549
03016 Transfer RNA biogenesis [BR:
zmo03016
]
ZMO0549
Enzymes [BR:
zmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ZMO0549
Messenger RNA biogenesis [BR:
zmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ZMO0549
Transfer RNA biogenesis [BR:
zmo03016
]
Prokaryotic type
tRNA degradation factors
ZMO0549
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
S1_TP0910
DUF7357
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
AAV89173
UniProt:
Q5NQ32
LinkDB
All DBs
Position
complement(543371..545617)
Genome browser
AA seq
748 aa
AA seq
DB search
MFDIKRQEIDWGGKKLTLETGQVARQADGAVIATLGETVVLCAVTAAKTVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATERETLISRLIDRPIRPLFPEGFYNETLVIAQVMSY
DGENEPDILAMIAASAALALSGVPFLGPIGAARVGYQDGEFILNPTLEQLEKSDLDLVVG
ATRDAVMMVESEANELPEEVMLNAVSFAHESLQPVIKAIINLAEQAAKEPWELVSYDDSA
LAAKVEELCYDNFDKAYRLTRKAERVDALSKAKAVLDEAFPEADPTEKLRIQKLAKKLEA
KIVRTAILKEGRRIDGRDLKTVRPIRSQVGFLPRTHGSALFTRGETQALVSTTLGTADAE
QMIDGLTGLHYERFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPVLPSKADFP
YTIRVLSDITESNGSSSMATVCGGCLALMDAGVPLTRPVSGIAMGLILEKDGFAILSDIM
GDEDHLGDMDFKVAGTEKGITSLQMDIKVAGITEEIMQKALEQAKGGRAHILGEMSKALG
EVRSEISNLAPRIETMSVPKDKIRDVIGTGGKVIREIVATTGAKVDIEDDGTVRLSSSDP
ANIEAAREWINGIVEEPEVGKIYNGKVVNIVDFGAFVNFMGGRDGLVHVSEIKNERVNKV
SDVLSEGQEVKVKVLEIDNRGKVRLSMRVVDQETGAELDDNRPPRENAERRGGERPRRDR
GPRRESGDRPARRDMEPEFAPAFLRKDS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatattaaacgccaggaaatcgattggggcggaaaaaaactgacactggaaacc
ggacaggttgcccgtcaggcagatggcgccgtcattgcgaccttaggtgaaacggtcgta
ttatgcgcggtaacggcagcaaaaacggtaaaagaaggtcaggatttctttcctttgacc
gtccattatcaggaaaaatattcagcagcaggccgtattcccggtggctttttcaagcgt
gaacgtggcgcaaccgaacgggaaacgctgatttcacggttaatcgaccgtccaatccgt
cctctgtttccggaaggtttctataacgaaaccttggtcattgcgcaggtcatgtcctat
gacggcgagaatgaaccggatatcttggcgatgatcgctgcttctgcggctcttgctctt
tccggtgtgcctttcttgggccccatcggtgctgcccgtgtgggttatcaagatggcgag
ttcattcttaacccgaccttggaacagcttgaaaaaagtgatcttgatctggttgtcggg
gctacccgtgatgccgtgatgatggttgaatcggaagcgaatgagcttcccgaagaagtc
atgctcaatgccgtttcttttgcgcatgaatctttacagccggttatcaaagctatcatc
aatctggcagaacaggccgctaaagagccttgggaactggtcagctatgatgacagcgca
ttggctgccaaagtcgaagaactctgctacgacaatttcgataaggcctatcgtctgact
cgcaaggctgaacgtgttgacgccttgagcaaggccaaagcggttcttgacgaagccttc
ccagaagctgatccgacagaaaagctgcgcatccagaagcttgcgaagaagctggaagca
aaaatcgtccgcaccgccattctgaaagaaggccggagaattgacggacgcgatctgaaa
acagttcgcccgatccgctctcaggttggattcttgccccgcacgcatggttctgccctg
tttacgcgtggtgaaacacaggctttggtttcaaccacccttggaacggcggatgctgaa
cagatgatcgacggtttaaccggccttcattatgaacgcttcatgctgcattacaacttc
cccccatattcggtcggtgaagttggtcgttttggtgctccgggtcgtcgtgaaatcggc
catggtaaactggcatggcgtgcgcttcatccggttttgccgagcaaggctgatttcccg
tataccatccgtgttttgtcggatatcaccgaatctaatggttcctcttccatggcaacc
gtttgcggtggctgccttgcattgatggatgccggtgttcccttaacgcgtccggtttcc
ggtatcgccatgggtcttattctggaaaaagacggcttcgctattttgtccgatatcatg
ggtgatgaagatcacttgggtgatatggactttaaggtcgccggtaccgaaaaaggtatc
accagcctccagatggacatcaaggttgctggcattaccgaagaaatcatgcagaaagct
ttggaacaggctaaaggtggccgtgctcatatcttgggtgaaatgtccaaagcgctgggt
gaagtccgctccgaaatttctaatttggcaccgcgcattgaaacaatgagcgtaccaaaa
gacaaaatccgtgatgttatcggaacgggcggaaaagttatccgtgaaatcgtggcgacc
acaggtgccaaggtcgatatcgaagatgacggcacggttcgtctgtcttcttctgatccg
gccaatattgaagcagcccgtgaatggatcaatggtattgttgaagaaccggaagtaggc
aaaatctataacggtaaagtcgtcaatatcgttgatttcggtgccttcgtaaacttcatg
ggtggccgtgacggcttggtacatgtttcggaaatcaagaacgaacgtgtcaacaaggtc
agcgatgtcctgtccgaaggtcaggaagtcaaagtcaaggttcttgaaattgacaaccgt
ggcaaggttcgcctgtctatgcgtgttgtcgatcaggaaaccggcgcagagctggatgat
aaccgtccgccacgtgagaacgcagaacgtcgcggtggtgagcgtcctcgtcgtgatcgg
ggccctcgtcgggaatctggcgatcgtccggcaagacgtgatatggaaccggaatttgct
ccggcattcctgcgcaaagatagctaa
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