Zymomonas mobilis subsp. mobilis ZM4: ZMO1538
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Entry
ZMO1538 CDS
T00221
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
zmo
Zymomonas mobilis subsp. mobilis ZM4
Pathway
zmo03030
DNA replication
zmo03430
Mismatch repair
zmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZMO1538
03430 Mismatch repair
ZMO1538
03440 Homologous recombination
ZMO1538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zmo03032
]
ZMO1538
03400 DNA repair and recombination proteins [BR:
zmo03400
]
ZMO1538
Enzymes [BR:
zmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ZMO1538
DNA replication proteins [BR:
zmo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ZMO1538
DNA repair and recombination proteins [BR:
zmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ZMO1538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
DUF655
HHH_3
Scaffold
Rep_fac-A_C
Motif
Other DBs
NCBI-ProteinID:
AAV90162
UniProt:
Q5NM98
LinkDB
All DBs
Position
complement(1567734..1571258)
Genome browser
AA seq
1174 aa
AA seq
DB search
MPYTPFVPLRIFSGFTMLEGAIEPKDITQHAKKMGFPAAGICDRNGLYGVMTFSDSGKKD
GVQPIIGSLLAVARPLRGGEASGQELKIDWLPLYAQDEDGYNNLCALVSHAHLGRPLELP
PHVSMEFLEQHSQGLLALTGGKEGALARLLAEEQQSEAEAYLTLLQKIFPDRLYIELSRR
SEEIEEAAEEGLIDLAYDRNIPLVATNPVCFLEADFHPAHDAMLCIADSAYVDSPDRRHS
SPEAWMKSGEEMARLFEDIPEAIQNSLVIAQRCAVAAPVRKPILPSLAGDREGETLMLRK
DAWAGLEARLAAMTTPVDRKAYEERLQYELNIIENMGFPGYFLIVADFIKWAKSNQIPVG
PGRGSGAGSVVAWALTITNLDPLRLGLLFERFLNPERVSMPDFDIDFCETRRSEVISYVQ
HKYGLDHVAQIITFGRMKARAVLKDTGRVLQMSYGQVDRLAKLVPSQASDPWTLDRALNG
VPEIASAYENEEDVHRLLDLAMKLEGLPRHSSTHAAGVVIGDRPLHQLVPLYRDPRSDFP
VTQFDMKYVEKTGLVKFDFLGLKTLSVLNKAVQMLKARGVEVDLDHIPLDDEAVFELLKQ
GDTVGVFQLESEGMRRTLAAVKPTRFEDIIALVALYRPGPMDNIPSFGARKNGGEEIVYP
HPLLEPVLKETYGIIVYQEQVMQAAQVLAGYSLGEADLLRRAMGKKIQSEMDAQRSRFVE
GSKKHDITENQANQLFDLIDKFAGYGFNKSHAAAYALVAYQTAWLKAHYRAEFYAAAMCF
DMALTDKLQVFVDDMRRSGLRYLPPDINRSQSDFTVEDGCVRYALGALKGVGEKAMDDIC
QEREKNGAFKSLDDFANRINPEHLNRRQLESLASAGAFDSLGVDRCAVKQSSEMIIGTAA
NIHRMRKSGQGGLFGMEEMAMPSIKLPEDKIWSLTERMNAEKEAFGFFFSSHPIDNYRSL
LSSLRIRSRADINRLAPPSYPQDDENPQDYRKKRIATQMAAMIEDVRWRDSARGRRYMMV
AASDASGQFFASCFDEKATKDLEQAAKEKACVLMDVELDWRPGDEAPRVSIRAIQLCENL
APSVRLKMTVATGEAEALPALSELVNRYRGGQGELYIRALLPDGASTYFLVGRHYILSAE
LKAKIKRLSGIQAVDLKSFVEEKQANSQKQPAYA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgccttatactcccttcgttccgttacggattttttccggtttcaccatgttggaagga
gcgatcgagccaaaagacatcacccaacatgccaaaaaaatgggttttccggcggcgggt
atttgtgatcgtaacggcctttatggcgtgatgactttttccgacagtgggaaaaaagac
ggggttcagccgatcatcggcagtctgcttgccgtcgctcgtccgctgcgtggcggggaa
gccagtgggcaggaattaaaaatagattggctgccgctctatgcacaggatgaagacggc
tataacaatctttgtgccttggtatcccatgcccatcttggccgtccgctcgaattgccg
ccccatgtctcgatggaatttctggaacagcatagtcaggggcttctcgcgcttacgggg
ggtaaagaaggcgctttggcacgcttactggcggaagaacagcaaagcgaagccgaagcc
tatctgacccttttacaaaaaatatttcccgatcgtttgtatatcgagctttcccgccgt
tccgaagaaatcgaggaagccgccgaagaggggctgatcgacttggcttatgatcggaat
attccgttagttgccactaacccagtatgttttttggaagccgattttcatcctgcccat
gatgcgatgctctgcattgctgattccgcttatgtggacagccccgatcggcggcatagt
tctcctgaagcatggatgaaatccggcgaagaaatggcgcggttatttgaagatatacca
gaggccattcaaaacagcttggtgatcgcgcaacgctgcgcggttgcggctccagtccgc
aaaccgattttgcccagccttgctggtgaccgcgaaggcgaaaccctgatgcttcggaaa
gatgcttgggcagggctagaagcgcgattggcagctatgacgacacccgtcgatcgcaaa
gcctatgaagaacggctgcaatatgaattaaatatcatcgaaaatatgggatttccgggt
tacttcttgatcgttgccgattttatcaaatgggcaaaaagtaaccagattcctgtcggg
cccggacgcggttctggtgctggatcggttgtcgcatgggcattgaccattaccaatctt
gatcctttgcgattgggcttgctgtttgaacgttttttgaatccggaacgtgtgtctatg
ccggatttcgatatcgatttctgcgaaacgcggcgctccgaagtaatcagctatgtccag
cataaatatggcctcgaccatgtggcacagatcatcacctttggacggatgaaggcgcgc
gccgttttgaaagatacgggtcgcgttttacagatgagctatggacaggtggatcgtctg
gctaaattggtgcccagtcaggccagtgatccttggacattggacagggcattaaatggc
gtgcctgaaatcgcctcggcttatgaaaatgaagaagatgtccatcgccttcttgatctc
gcaatgaaactcgaaggtctgccgcgtcacagctcaacccatgccgcaggggtggtcatc
ggggacaggccgttacatcaattagtgcccctttatcgcgatccgcgttctgattttccg
gtgacgcaattcgatatgaaatatgtcgaaaaaaccggattggtgaaattcgactttttg
ggattaaaaaccctctcggtgctgaacaaagcggttcaaatgctgaaagcgcgcggggta
gaagttgacctcgatcatatccccttggatgatgaagccgtttttgaattgctgaaacag
ggtgacactgtcggggtgttccagttggaatccgaagggatgcgccgcacgcttgctgcg
gtgaagccgacccgttttgaagacatcatcgcccttgttgcactctatcgtccggggcct
atggataacatccccagctttggcgcgcgtaaaaatggtggcgaagaaattgtctatccc
catcctctgctcgaacctgttttgaaagaaacctatggtattatcgtttaccaagaacag
gtgatgcaggccgcgcaggttttggccggttactcccttggggaagccgatctgttgcgg
cgtgcgatgggtaagaagattcaatcggaaatggacgcgcaacgctcgcgttttgtcgaa
ggcagcaaaaaacacgatattacagaaaatcaagcgaaccaactttttgacttgattgat
aaattcgcgggctatggcttcaataaaagccacgctgccgcctatgcccttgttgcgtat
caaaccgcatggctaaaagcccattaccgcgccgaattttatgccgccgcgatgtgcttc
gatatggctttgaccgacaagttacaggtctttgttgatgatatgcgccgctctggtttg
cgctatctcccgcctgatatcaatcgcagccaatccgattttacggtggaagatggctgc
gttcgctatgcccttggtgctttgaagggggtcggtgaaaaggcgatggatgatatctgt
caggaacgtgaaaagaacggcgcatttaaaagccttgatgattttgccaatcgcatcaat
cctgaacatctcaaccggcggcaattggaaagtcttgcttccgctggtgcctttgactct
cttggggtggatcgctgcgctgtcaaacagagcagcgaaatgatcattggcacggcggct
aatatccaccgtatgcggaaaagcgggcagggtggccttttcggtatggaagaaatggcg
atgccttccatcaaattaccggaagacaaaatatggagcctgaccgaacggatgaatgcc
gaaaaggaagccttcggtttcttcttctcttcgcatccgatcgacaattaccgctctctg
ctttccagcttacggatcagaagccgcgctgatattaaccgtctggcaccgccttcctat
ccgcaagatgacgaaaatcctcaagattatcgtaaaaaacggatcgcgacccaaatggcg
gcgatgatcgaagatgtccgctggcgggattctgctcgtgggcggcgctatatgatggtc
gcggcttcggacgcttccggccaattttttgccagttgctttgatgaaaaagcgactaaa
gacttggaacaagcggccaaggaaaaagcctgcgttctcatggatgtcgaattggattgg
cgaccgggcgacgaagctccccgtgtctctatccgtgccattcagctttgcgaaaattta
gccccctctgtccgcctgaaaatgacggtcgcaacaggcgaagccgaagccctgccagcc
ttatcggaattggttaatcgctatcgcggcgggcaaggggaattatatatccgcgcgctt
ttgcctgatggcgcttccacctattttctggttggtcgccattatatcctaagcgccgaa
ttaaaagccaaaatcaaacgcctgtccggcatccaagccgtcgatctcaaatcttttgtc
gaagaaaaacaggccaacagccaaaaacagcccgcctatgcctaa
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