Zymomonas mobilis subsp. mobilis ZM4: ZMO1588
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Entry
ZMO1588 CDS
T00221
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
zmo
Zymomonas mobilis subsp. mobilis ZM4
Pathway
zmo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ZMO1588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmo03400
]
ZMO1588
DNA repair and recombination proteins [BR:
zmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ZMO1588
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ZMO1588
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_21
AAA_16
AAA_29
DnaJ_CXXCXGXG
AAA_25
RsgA_GTPase
AAA_33
Mtrc-MtrF_II-IV_dom
Motif
Other DBs
NCBI-ProteinID:
AAV90212
UniProt:
O31151
LinkDB
All DBs
Position
1624746..1627586
Genome browser
AA seq
946 aa
AA seq
DB search
MLSTISIRGAREHNLKNVSIDIPRNKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLEMMQKPDVDHIEGLSPAISIEQKTTSKNPRSTVATVTEIYDYMRLLWARVGIPY
SPATGLPITAQTVSQMVDRVMALPEGSRLHLLAPVVRGRKGEYRKEMAEWQKAGFSRLRI
DGEYYLIEEAPKIDKKRKHDIEVVVDRLVIKEGLETRLAQSLETALKLAGGIAISEPADE
GSFEPMLFSEHFSCPVSGFTIPEIEPRLFSFNAPQGACPACDGLGEKPYFDVRLIVPNES
LSLAKGALMPWARSTPPSPYYMQILSSLARYYDFSLETPWKKLPEKIQNVILYGSEGEVI
PLRFSEGNQIYEVEKAFEGVIRNLERRLVTTDSESIREDIGRYQSAAPCEVCHGARLRPE
ALAVLIDHHNISDVTKMTVKPALEFFRQLPEKLTEAQNQIAERILKEIIERLGFLDNVGL
DYLSLDRSSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNDRLLETLKRLR
DLGNSVLVVEHDEDAIRLADYVVDMGPGAGVMGGKVIAAGSPQDIIDCPDSLTGAYLSGR
REIAVPDKRRKGNGKKLTIKGATANNLQNVTASIPLGTFTCVTGVSGSGKSSLILDTLYT
AAARELNGARLISGDYKSISGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTAIREWFAK
LPEAQARGYKAGRFSFNVKGGRCEACQGDGVKKIEMHFLPDVYVTCDVCHGARYNRETQE
VKFKGQSIADVLNMTVDQAAEFFEAVPSIRDKMAMLARVGLGYIKVGQQATTLSGGEAQR
VKLAKELSKRATGRTLYILDEPTTGLHFEDVRKLLEVLNALVDQGNSIVVIEHNLDVIKT
ADWLIDLGPEGGTGGGQIIAAGTPEKVAETEGSYTGHYLKRMLQPK
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgactatttctattcgcggcgcacgcgaacataatctcaaaaatgtttcgatt
gatattccgcgcaataaacttgtcgtcatgaccggcttgtcggggtcgggtaaatccagc
ctcgcttttgatactatctatgccgaaggacagcggcgttatgtcgaatccctgtccgct
tatgcgcgccaatttttggaaatgatgcaaaagccggatgtcgatcatattgagggttta
tcgccagcgatttctatcgaacagaaaacgaccagcaaaaatccgcgttcgacggtcgcc
acagtcaccgagatttatgattacatgcggctgttatgggcgcgggtcgggattccttat
tctccggcaacaggattgcctattaccgcgcagaccgtcagccagatggttgatcgggtg
atggctttgccggaagggagccgattgcatttgttggctccggtcgtcagaggacgaaaa
ggcgaatatcgcaaagaaatggccgaatggcagaaagcgggcttttcacgtcttcggatt
gatggtgaatattatctgatcgaagaagcacccaaaattgacaagaaacgcaagcatgac
attgaggttgtggttgatcgtctggttatcaaagaagggctggaaacccgtttggcgcaa
tcgcttgaaaccgcattaaaattggcgggcgggattgcgatttccgagccagccgatgaa
ggcagtttcgagccgatgcttttttccgagcatttttcttgtccagtatcaggttttacc
attcctgaaatcgagccacgccttttctcttttaacgcgccacagggtgcctgccctgct
tgtgatgggttgggcgaaaagccttatttcgatgtgcggttgattgtgccgaatgaatcc
ctttctttggcgaagggggctttgatgccttgggcgagaagcacgccgcccagcccttat
tatatgcagattttatccagtctggcgcgttattatgatttctcgttggaaacgccttgg
aaaaagctccctgaaaaaattcagaatgtcattctttacgggagtgaaggcgaagttatt
cctttgcgcttttctgaaggtaatcagatttatgaggttgaaaaagcctttgaaggtgtg
atccgcaatttggaaaggcggctggtaacgactgatagcgaaagcattcgcgaagatatt
ggacgttatcaatcggcagcgccctgcgaggtctgtcatggtgctagattaaggccggaa
gccttggccgttctgattgaccatcataatatttctgatgtgaccaagatgaccgtcaag
ccagctttggaatttttcagacagttacccgaaaagctgacggaagcacaaaatcaaatt
gctgaacgcattttgaaagagattatcgaaaggctaggattcctcgataatgtcgggctg
gattatttgagcctcgaccgctcttccggcacactttctggtggtgaaagtcagcgcatc
cgtctcgctagtcagatcggttccggtttgtccggtgttttatatgtgttggatgaaccc
tctatcggtttgcatcagcgtgataatgatcgcttgcttgaaaccttgaagcgattgcgc
gatttgggcaattcagttctggttgtcgagcatgatgaagatgctattcgtcttgccgat
tatgtcgtcgatatgggccccggtgcgggggtgatgggtggtaaagtgattgccgccggt
tcgccacaggatattattgattgtcctgatagtttgacaggcgcttatctttcagggcgg
cgggaaattgcagttcccgataaacgtcgcaaggggaatggtaaaaagctgaccattaaa
ggagcgaccgccaataaccttcaaaatgtgacggcatctattcctttggggactttcacc
tgtgtcacgggggtttccggctccggtaaatccagcctgattttggatacgctttatacg
gcggcggccagagaattgaatggtgcgcggctgattagtggtgactataaatctatttcg
ggattggagcatctcgataaggtgattgatattgaccaatcacctattgggcgcacgccc
cgttccaatccggcaacctataccggtgcgtttaccgctattcgggaatggtttgccaaa
ttaccggaggctcaagcccgcggttataaagccggtcgttttagttttaacgtcaagggc
gggcgttgtgaggcttgccaaggtgatggcgtcaaaaagattgagatgcatttcttgccg
gatgtttatgtcacctgtgatgtctgtcatggtgcgcgctataatcgcgaaacgcaggag
gtcaaattcaaaggccaatctattgccgatgttttgaatatgacggtcgatcaggcagca
gaattttttgaagcggtgccttctatccgtgacaagatggcaatgcttgcccgtgttggt
ttgggctatatcaaggttggtcagcaagcgacgactttatcaggcggtgaggcgcagcgc
gttaaattagcaaaagaattgtcgaaaagggcaacagggcgaacgctgtatattcttgat
gaaccaaccacgggtcttcattttgaagatgtccgaaaattgctggaagttctgaatgct
ctagtcgatcaaggaaatagcattgtcgtgatcgagcataatctggatgtcattaagaca
gctgattggctaattgatctgggtcctgaaggtggcactggtggcggtcaaattattgcg
gctggcacgccagaaaaagtggccgagactgaaggaagctatactggccattatttaaaa
cggatgcttcaacccaaatag
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