Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0114
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Entry
Zymop_0114 CDS
T01556
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
Pathway
zmp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Zymop_0114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmp03400
]
Zymop_0114
Enzymes [BR:
zmp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Zymop_0114
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Zymop_0114
DNA repair and recombination proteins [BR:
zmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Zymop_0114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEI37018
UniProt:
F8ETK8
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All DBs
Position
126219..127031
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AA seq
270 aa
AA seq
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MPELPEVETTVRGLEKVLLGKKLESVKAFRNNLRRPIPEDIIERLEGCIVSSLGRRAKYG
LIFTNRQDVLVFHLGMSGRWRIDPSIIEKHDHFLIKTADGCCVTLYDPRRFGSLDLVKRE
VLAIWPYFLKLGPEPLSDDFTVDFLAEKLTRYSSSIKKILLNQNIVAGLGNIYVCETLYK
SGIHPSRSGKSLNFQEIESLVKNIKLILEEAISKGGSTLRDYAQPDGELGYFSNFFQVYG
KEGDKCQCGTPIMRSIEGGRSTYFCPSCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccagaggtagaaacaaccgttcgaggattagaaaaagttctgctcggg
aaaaagttggagagcgtaaaagctttcagaaacaatttacgtcgtccgataccagaagat
attatagaaagattagaaggctgtattgtgtcctctttgggacgacgtgccaaatacggt
cttatctttactaatcgtcaggatgtcctcgtttttcatctcggcatgtcagggcgttgg
cgtattgacccatctataatagaaaagcatgatcactttttgataaaaaccgctgatggc
tgttgtgtaacgctctatgatcctagacgatttggttcgctagatttagtaaaaagagag
gttttagcgatatggccttactttttgaaattagggcccgaaccactcagcgatgacttt
acggtagattttttggctgagaagcttacgcgctattcaagttctatcaaaaaaatacta
ttaaaccagaatattgttgctggacttggcaatatttatgtctgtgaaaccctttacaaa
tcgggtattcaccccagccgctctggcaaaagtttaaattttcaagaaatagagagcctt
gttaaaaatattaaacttattttagaagaggctatctccaagggaggatcaaccttgcgt
gattatgcgcagcctgatggagaattaggctatttttctaatttttttcaggtttacggc
aaagaaggcgataagtgccagtgtggaacgcccattatgcggagtattgaagggggacgc
tccacttacttttgtcccagctgtcaaaaataa
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