Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0190
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Entry
Zymop_0190 CDS
T01556
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
Brite
KEGG Orthology (KO) [BR:
zmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmp03400
]
Zymop_0190
Enzymes [BR:
zmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Zymop_0190
DNA repair and recombination proteins [BR:
zmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Zymop_0190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF7645
iSTAND
Motif
Other DBs
NCBI-ProteinID:
AEI37093
UniProt:
F8EU13
LinkDB
All DBs
Position
218211..221183
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AA seq
990 aa
AA seq
DB search
MADISRIFTIPFHQAFADSLVAGLIDRYKPMELARGLILLPNNRSVRAITEAFVRRSSSG
LLLPRMVPVGDPFLDERLGAFLDPVDLTDPFPPAITPLDRHFRLTRLVKKAMKQQGKEIS
PSESHRLAEDLGLTLDQLIAAEIDPAALSTLIDPLAEEELAKHWQSSLNLLECIITDWPQ
ELANTGQIEMQDRRNKLLDRLTERWQKQPPKGPVIAAGAITGSPVSARLLRVISVLESGL
IVLPGLDLTMSEEEWALLGPHERDPDTGIKQPSLESHPQFQLKLLLERMGIARNEVALWP
YENKKMVHKERSLAISHAMAPARYTNQWLNLSEQERSFPDVSIVEAAHPEEEAQIIAIAL
RQAIEKPGVTAALVTPDRTLAIRVSALLTRFGIQADDSAGRPLSLTPPGMLLLDIISAAA
DHFSAVSFLVVAKHPFVAFSEERALWREHIRALDMVLRGPQLKIGLAGISQKIAQEIDKK
RADPNLLSWWESVKTAFLALDNRHQEILPLAELIRLLRETGQTLAGDKLWSGPDGRMAAD
LITELEQLAIHHKELMSFADFGRILRQLMDKQAVRPVSGGHPRIFIWGLIEARLQHADLM
IAASLNEGIWPPISDADPWLAPRIRSELGLPGLDLRIGIAAHDFASILGAGRILLTRARR
DARAPTIASRFWLRLEAMTGGLPKAAELPYYAKMLDEPKIFKPALRPAPKPPVPDRPKRI
AVTRFDSLQADPYSYYASNILRLRRLDPVDAAPTVAWRGSLIHSILEDWVKKDNADPKKL
QTRALNIWGDINSHIIQKILGTPRLLQAINWIEQQIQQMTEEGRSIVKVEQYGKCLIEGI
ELFGWVDRIDRLSDGSLALVDYKTGQPPSSKSVTSGDNLQLGLLALIIEQGGIPSIEGHV
QAFEYWSMAQNKNKQAGYKISVLGGKQAISPEAFLNFTEKRFSEVIQSYLLGNAAFTARP
YRGKKLYDDYVQLMRFDEWRANPQHKVIGS
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcggatatatcccgaatttttacgattccctttcatcaggcttttgcagattctctg
gtagcgggtcttatcgaccgttataaaccgatggaattagcacgtggcttgatcttgtta
cccaacaatcgttcagtacgggcgattaccgaagcctttgtccgccgatcttcttccggt
ttactcttgccgcggatggtgcctgtgggtgatccgtttttagatgagcgtttgggtgca
tttttagatcctgttgaccttactgatccgtttcctccggcgattacacccttagatcgg
catttccgcctgacccgtcttgttaaaaaagcaatgaagcagcaggggaaagagatttct
ccttctgaatcccatcgcttggctgaagacttaggcttgaccttagatcaattgattgcc
gcagaaattgatcccgcagctttatccaccttgattgatcctttggccgaagaagagtta
gcaaagcactggcagtcatctttaaatttattagaatgtattattaccgactggcctcaa
gaactggctaatactggtcaaattgaaatgcaggatcggcgaaataagctattagatcgc
ttgactgaacgttggcaaaaacaaccacctaaaggacctgttattgcagccggtgccatt
acgggatcgcctgtttcagcgcgtttgttacgcgtaatatcggtgttagaaagtgggtta
attgttttacccggtcttgatctgactatgtcagaagaagaatgggcattactcggcccg
catgaaagggatcccgataccggcatcaaacagccttccttagagagtcatcctcaattc
cagctaaaattattgctagagcgtatggggatcgctcgaaatgaagtagccctttggcct
tatgaaaataaaaaaatggttcataaggaacggagccttgcgattagtcatgcgatggca
ccggcacgctacactaatcaatggctgaatttatcggaacaggaacgctcttttccggat
gtttctattgttgaggcggcgcatcctgaagaagaagcacagattattgctattgcttta
cgacaggctatcgaaaaaccgggggtaacggcggcgcttgtaacgcctgatcggacttta
gctataagggtttctgccctattgacgcgttttggtattcaggccgatgatagtgcaggg
cgtcctttatctctaacaccccccggtatgctcttattggatattatttcggcggccgcg
gatcatttttctgccgtaagttttctggtcgttgccaagcatcctttcgttgctttcagc
gaagaacgggccttgtggcgggagcatatccgtgctttggatatggttttaagagggcca
caattaaaaatcggtctggcaggtatttctcaaaaaatagcccaagaaattgataaaaaa
cgtgccgatccaaatttattatcgtggtgggaaagcgtaaagacggctttcttggctttg
gacaaccgacatcaagagatccttcccttagctgaactgatccgtttactgcgggaaacg
ggacaaacccttgccggtgataaattatggtcagggccagatggccgaatggccgctgat
ttaattaccgaactcgaacaattagctatacatcacaaagaattaatgagttttgcagat
ttcgggcgtattcttcggcaattgatggataaacaggcggttaggcctgtttcggggggg
catcctcgtatttttatctggggtttgattgaagcgcggttgcagcatgccgacttgatg
attgcggctagtctaaacgaaggtatttggccgccgatcagtgacgccgatccatggtta
gcgcctagaatccgctctgaattaggattacctggattagatttacgtattggtattgcg
gcgcatgattttgcctctattctaggagcaggcagaattttgcttacccgggccagacgg
gatgctcgtgcaccgactattgcatcacggttttggcttagactggaagctatgacaggg
gggttacccaaagccgcagaacttccttattacgcaaaaatgctggatgaacccaaaatc
tttaagccagccttgcgaccagctccaaaaccgccagttccagatagaccaaaacgcatt
gctgttactcgttttgatagcttgcaagccgatccttatagctattatgccagcaatatt
ttacgtttgaggcggcttgatccagtggacgccgcaccaacagtcgcttggcgtggtagc
ttgatccatagtattcttgaagattgggtaaaaaaagataacgctgatcctaaaaaatta
caaacacgggcgctcaatatttggggcgatattaatagccatatcattcaaaaaatattg
ggcacgcctcgtttgctgcaagcgattaattggattgagcagcaaatacaacaaatgacg
gaagaaggtcgatctattgttaaggtcgaacaatatgggaaatgtttgatcgaaggcatc
gaattattcggctgggttgatcggattgatcgtctatcagatggttcattggctcttgtt
gattacaagacgggtcaaccccctagcagtaaatcggttacgagtggtgataacctacaa
ttaggtttgcttgcactgattatcgaacagggcggtatcccttccatagaaggtcatgtt
caggcttttgaatactggtcgatggcacaaaacaagaataaacaagcgggttataaaatt
tctgtattaggaggtaaacaggctatttcgcctgaggctttcctcaattttacagaaaag
cgtttttctgaagttatacaatcctatttgttaggaaatgctgcttttacggcccgtcca
tatcgggggaaaaagctttatgatgattatgttcagttgatgcgatttgatgaatggcgc
gccaatccacagcataaagtgattggtagttaa
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