Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0230
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Entry
Zymop_0230 CDS
T01556
Name
(GenBank) Polynucleotide adenylyltransferase region
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
Pathway
zmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Zymop_0230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmp03019
]
Zymop_0230
Enzymes [BR:
zmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Zymop_0230
Messenger RNA biogenesis [BR:
zmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Zymop_0230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AEI37133
UniProt:
F8EU53
LinkDB
All DBs
Position
263233..264441
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AA seq
402 aa
AA seq
DB search
MSIYLPDASWRHHNGLGHLIDVFGGDSMIRFVGGGVRDSLLKTAVSDIDCATRHHPEETV
KLIKDAGFKAVPTGIQHGTVTAVLPSGPVEITSLRKDVSTDGRHATIAYSDSWQDDAMRR
DFTINALYAEPNSSLIHDYFGGIADLEAGCVRFIGDPETRIAEDHLRILRYFRFQARFGR
GIPDAASLAACIKRANDLMALSRERIASELIKILALPAPLAIITLMIQSGIFTPIIPEIR
DNSLKQLKRLLEREKAYSVKGDPLLRLAALLPEDPELGRSIAQRLRFSKEQKKYLIALLT
PTQDAPCALAWKIGKQAAIGHIVLFREEDALPSTMSLLQDWECPVFPLKGGDLIKKGLPA
GPIVATTLQGIQQQWIEAGFPEAEWVHQKADQAIDQFLLAAK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctatctacccgatgcgtcatggcgtcatcacaacggccttggacatttgata
gatgtttttggtggcgattcgatgatccgctttgtcggggggggcgtccgagatagttta
ttaaagaccgctgtcagcgatattgactgtgcgacccgccatcacccagaagaaaccgtc
aaattaattaaggatgccggctttaaagctgttccgacgggtatccagcatggaacggtc
actgcagttttgccttcgggaccagtcgaaattaccagcttaaggaaggacgtttcgaca
gatggtcggcatgccaccattgcttatagcgatagctggcaggatgatgcgatgcggcgt
gattttactattaatgcgctttatgccgaacctaatagcagcttaatacatgattatttt
gggggtattgcggatcttgaagctggatgtgtccgtttcataggtgatcctgaaacgaga
attgcagaagatcatttaagaattttacgttatttccgctttcaggcgcgctttggacga
gggatccccgatgcggcttctttagcggcctgtattaaacgtgcgaatgatttaatggcc
ttgtctcgagaacgcattgccagtgaattaataaaaatattagccctccctgcacccttg
gctatcattacgttgatgattcagtcgggcatttttacgccgattatacctgaaataagg
gataatagcctgaaacaactgaaacgtttgttagaacgggaaaaagcttattcagtaaaa
ggggatcctcttttacgacttgcggcgcttttacctgaagatcctgaattagggcgatct
attgcacagagattgcgtttttcaaaagagcaaaaaaaatatttaatagcccttttaacc
cccacccaagatgcgccttgtgctttggcatggaaaattggcaaacaagcggcaatagga
catatagtcctttttagggaagaggatgccctaccctctacgatgtctttattgcaggat
tgggaatgtcctgtttttccccttaaagggggagatcttatcaagaaaggtttacccgct
ggccctatcgtcgcgaccacgctacagggtattcaacaacaatggatagaggctggtttt
ccagaagctgaatgggttcatcaaaaagcggatcaagcaattgatcagtttttattagcc
gctaaataa
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