Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0404
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Entry
Zymop_0404 CDS
T01556
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
Pathway
zmp03030
DNA replication
zmp03430
Mismatch repair
zmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Zymop_0404
03430 Mismatch repair
Zymop_0404
03440 Homologous recombination
Zymop_0404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zmp03032
]
Zymop_0404
03400 DNA repair and recombination proteins [BR:
zmp03400
]
Zymop_0404
Enzymes [BR:
zmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Zymop_0404
DNA replication proteins [BR:
zmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Zymop_0404
DNA repair and recombination proteins [BR:
zmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Zymop_0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_16
AAA_30
AAA_14
AAA_24
AAA_19
AAA_18
DUF815
ResIII
AAA_assoc_2
PIF1
DUF5371
Motif
Other DBs
NCBI-ProteinID:
AEI37307
UniProt:
F8EV19
LinkDB
All DBs
Position
complement(465811..467694)
Genome browser
AA seq
627 aa
AA seq
DB search
MVDSSSSITPYRVLARKYRPQHFSDLIGQDAMVRTLGNAIARDRLAHAFLLTGVRGVGKT
STARLIAKALNCIGPDGKGGMTIDPCGNCEPCRAIAEGRHIDVIEMDAASHTGVDDIREI
VESVRYASVSARFKVYIIDEVHMLSKNAFNALLKTLEEPPVHVKFIFATTEVNKVPITVL
SRCQRFDLRRISSSLLAEYFTKIAHQEQVVAEDEALALIAKAAEGSVRDGLSILDQAIAH
SAGQVIAADVRDMLGLSDGSVIRSLFSALLQGQGAEVLDHIKAQYDLGIEPEALIQGLLQ
IVHAVTRSKMGRPEQQSIRSTEEQRWLSDLGQKLSFPVLHRLWQLLLKGHQEVQTATLPL
EAAEMALLRVVHASQLPDPVAIINHLKISGQQSAVVSPPSSDERRGMDPIISDQNLGDGS
EISKKNTFEDGTEAVASKSTPSLPHEREPTHTVSQDSRANSPSAPIEEWDNNSSDGPVIL
PPTTSQPIESVASSCASSKENFDQDIDINNSSFPSDFQSLTETLFGSGNALIGHWLEDYG
RLITYNPPKLVLEAHPRLTREFHQKLMQALKNLTGEIWEVIFSKEQTGNLSFREQDLAQK
KAEKEALLNMPIIKTVFEIFPNAQLVE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggttgattcttcctcttcgattaccccttatcgggttttagcccgtaaatatcgtcca
cagcatttttctgatcttattggtcaagatgctatggtgcggacgctcggtaatgcgatc
gcgcgggatcgattggcccatgcttttttattaacgggcgttcgcggtgtcggtaaaacc
tctactgcccgattgattgcaaaagcattgaactgcattggccccgatggaaaggggggc
atgaccatagatccttgtggtaactgtgagccctgtcgagctattgccgaagggcgacat
attgatgtcattgagatggatgccgcatcgcacaccggggtcgatgatattcgggaaatt
gttgaatctgtcagatatgcttcggtttcagcgcgatttaaagtctatattatagatgaa
gtacatatgctttccaaaaatgcttttaacgctttgttaaaaacattagaagaaccccct
gtacatgtgaagtttatctttgccacgaccgaagtaaataaagtgccaattacagtttta
tcccgttgtcaacgttttgacctacggcgaatatcttcttctttactagcggaatacttc
acgaaaattgcccaccaagaacaggtcgtagcggaagatgaagctttagccttgatcgcc
aaagccgcagagggctccgttcgtgatggtctttctattttagatcaagctattgctcat
agtgcagggcaagttatcgctgctgatgtccgcgatatgctgggtttatcggatggaagc
gttatccgatctttgttttcggccttactgcaggggcaaggtgcagaggttctcgatcat
attaaagcccagtatgatttaggaatagaaccagaggctttaattcaaggattattgcag
attgtccatgctgtcacgcgtagtaaaatgggtcgaccagaacaacaatctataagaagt
actgaagaacaaagatggctttctgatttaggacaaaagttgtcctttcctgttcttcat
cggctgtggcaacttttattaaaaggccatcaggaagtgcaaacggcaacgttaccttta
gaggcggcagaaatggcccttttacgggtcgttcatgccagtcaacttcctgatcctgtg
gccattatcaatcatcttaagatctcgggacaacaatcagcggtagtttcacccccttct
tctgatgaaagacggggaatggaccctataatatctgatcagaatttgggcgatggatct
gaaatctcaaaaaaaaacacttttgaagacggtactgaagcggtagctagcaaaagcact
ccatctttacctcatgagcgggagcctactcatacagtatcccaagacagtagggcgaac
agcccctctgcgcctatagaagaatgggataataacagctctgatggacccgttatttta
cctccaactacatctcagccgatagaaagcgtagcttcatcatgcgcttcctcaaaagaa
aattttgatcaagatatagatattaataatagctcttttccgtctgatttccagagttta
acagaaacactttttggttctggtaatgcccttattggtcattggttagaagattatgga
cgattgattacgtataatccgcctaaattggttctcgaagcgcaccctcgtcttacccga
gaattccatcaaaaattaatgcaggccctgaaaaatctaacaggagagatttgggaagtt
attttttcaaaagaacaaacaggaaatttaagtttcagagaacaggatttagcacagaag
aaagctgaaaaagaagcgcttcttaatatgcctatcattaaaacagtgtttgaaattttt
ccaaatgcgcagttagtagaataa
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