Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0409
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Entry
Zymop_0409 CDS
T01556
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
Pathway
zmp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Zymop_0409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmp03400
]
Zymop_0409
Enzymes [BR:
zmp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Zymop_0409
DNA repair and recombination proteins [BR:
zmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Zymop_0409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF1657
MTR4_beta-barrel
TraB_PrgY_gumN
Vps53_N
TMCO5
DUF7260
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
AEI37312
UniProt:
F8EVA5
LinkDB
All DBs
Position
471163..471408
Genome browser
AA seq
81 aa
AA seq
DB search
MSQEKPISDLSFEEALKKLEEIVHRLESGDTTLDDSIRMYSQGDALKKQCEARLKAAQAK
IEQISLDQDGKPQNVRPFDAE
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagaaaaaccaatatctgatttgagctttgaggaagctttaaaaaagctggaa
gaaatcgttcatcgccttgaaagcggggatacaacccttgatgactctatccggatgtat
agccaaggtgatgccctaaaaaaacagtgtgaagccaggttaaaagcagcacaggcaaaa
attgaacagatcagcctggatcaggacggcaaaccccaaaatgtccgtccttttgatgcg
gagtaa
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