Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0524
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Entry
Zymop_0524 CDS
T01556
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
Brite
KEGG Orthology (KO) [BR:
zmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zmp03016
]
Zymop_0524
Enzymes [BR:
zmp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Zymop_0524
Transfer RNA biogenesis [BR:
zmp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Zymop_0524
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AEI37426
UniProt:
F8EVU9
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All DBs
Position
607908..609080
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AA seq
390 aa
AA seq
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MQIHPLISDSETLAALCARLSRADFVAIDTEFIRENSYWPELCLIQIADDKEAAAIDPLA
NGLDMTPLTDLLVNNEQLLKVFHAGGQDLEIVHHHTGKMPFPLFDTQIAAMALGVGEQVG
YSNLVEHYLSIKLDKGARFTDWSRRPLDRRQLDYAIGDVTHLATLFPMLLNELREKGRGD
WLNQEMERLADPEQYINDPEKSWLRIRIPNRKSDTLGRLKALAAWREYEAQEKNLPRGRI
AKDETLADLAAHPPRRQQELIKVRGLSGNWGNNDIGQRLMSALKEATPLKPEEIPNRGDK
KGGIGKDGAMIADLLKLLLKVRARDAEVAARLIARSDDIDALIAGQREDMPILTGWRYEL
FGKDALALIEGKMAFSVQKNKVVMTMIENA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcatcctcttatttcagatagcgaaacgctagccgctctttgcgcccgatta
tctcgggctgacttcgttgccattgataccgaatttattcgggaaaacagctattggccg
gagttatgcctgattcagatcgcggatgataaagaagccgcggccattgatccactggct
aacggcctggatatgacccctcttactgatttgttggtcaataatgaacagcttcttaaa
gtttttcatgctggtggccaagatcttgagattgtccaccatcatacagggaaaatgccc
ttccccctttttgatacccagattgccgctatggcacttggagtcggggaacaggttggt
tattccaatctggtagaacattacctctctataaaattagataaaggggcgcgttttacc
gactggtcacgccgtcccttggatcgtcgtcaattagattatgccattggagatgtaacc
catctcgctactttatttcctatgttactgaatgaactgcgcgagaaaggacgcggggat
tggttaaatcaggaaatggaacggttggctgatcctgaacaatatatcaatgatcctgaa
aaatcatggctaagaataagaatacccaatcgtaaatcggatactttagggcgattgaag
gccttggctgcatggcgagaatatgaagcccaggagaaaaatttaccgcgtggacgcatt
gccaaagatgaaaccttggccgacctagccgcccatcccccacgccgccagcaagaactg
ataaaagttcgaggcctttcaggtaattggggcaataacgatattggtcaacgtttgatg
tccgccttaaaggaggcaacccctttaaaacctgaagaaatccctaatcgcggcgataaa
aaggggggcatcggtaaagacggggccatgatcgcggatttactaaagttacttttaaaa
gtgcgggcccgcgatgcagaagtagccgcccgtttgatagccagaagtgatgatattgat
gctcttatcgctggtcagagggaagatatgcccattttgacaggatggcgttatgagctt
ttcggaaaagatgccttggccctgattgaagggaaaatggcttttagcgttcaaaaaaat
aaagtggtaatgaccatgattgagaatgcgtga
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