Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0642
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Entry
Zymop_0642 CDS
T01556
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
Pathway
zmp03420
Nucleotide excision repair
zmp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Zymop_0642
03430 Mismatch repair
Zymop_0642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmp03400
]
Zymop_0642
Enzymes [BR:
zmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Zymop_0642
DNA repair and recombination proteins [BR:
zmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Zymop_0642
MMR (mismatch excision repair)
Other MMR factors
Zymop_0642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_22
DEAD
AAA_16
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AEI37544
UniProt:
F8ERT6
LinkDB
All DBs
Position
736575..738908
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AA seq
777 aa
AA seq
DB search
MTDSLDFSPFSENFPEEPAYLTRLNPEQKEVVETTEGPVLVLAGAGTGKTAALTARLAHL
IDRLKAWPSQILAVTFTNKAASEMRQRVGELLGNHAEAMPWLGTFHAIAAKMLRRHAELV
GLNSNFTIIDTDDQIRLLKQLIQAQDIDEKQWPARQLAGIIDRWKNRGLTPDKVFGKESD
SFADGQGCQLYKAYQQRLLSINACDFGDLLLHMLVIFTQHQEVLSDYQERFRYIMVDEYQ
DTNQAQYLWLRLLAQKRQNICCVGDDDQSIYSWRGAEVANILRFEEDFTGAKIIRLEHNY
RSTPHILAAASGLIAHNNSRLGKTLWTERPQGEKVKVVGVWDGPEEAKRLVADIQSLRHS
QTPLNSMAILIRAQFQTREFEDVFVAKNIPYRIIGGFRFYERAEIRDALAYLRVIAQPSD
DLAFERIINVPRRGIGKKAMEKLYYRAFSDHIPLTEAAEKLVSENAFGSIATRALSQLLT
DFSQWREGLSIIGHADITRKMLDESGYKAMLRADADIQSAGRLENLVELARAMEDYDDLG
SFLEHVSLVMEHETGPIDDKVTLMTMHAAKGLEYDHVFLAGWEEGVFPSQRSLDEGGLQS
LEEERRLAYVGITRAKKFCTIFHAANRRIYGQWMSSSPSRFITELPEQHISQKSLSNKKT
SPSSWRDVWAADRHKNSPTSIPPVFTSRKKDESSPWQLASHRGPGWARAQKVAPAPLSSP
RPIRKEATAIYHRGDKVTHPKFGQGTIENIESDKLTIRFHDEEAGIRKLLNRFVTPA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
gtgactgactctttagacttttcgcctttttctgaaaattttccagaagaaccggcctat
cttacgcgtctcaaccctgaacaaaaagaggttgtagaaactacagaagggccggttctc
gtactggctggggctggcacggggaaaaccgctgctttaacggcgcgattagcgcatctt
atcgaccgtttgaaagcgtggccttcccagatattggcggtgacttttacgaataaagct
gccagtgaaatgcgccaacgggtaggcgaattattgggcaatcatgcagaagctatgcct
tggctgggcacctttcacgcgattgctgccaaaatgttgcgacgacatgctgaattagtc
ggactcaattctaatttcactattattgataccgatgaccaaatccgtctcctaaaacag
ctcattcaagcccaagatattgatgaaaaacaatggccagccagacaactggccggtatt
attgatcgttggaaaaatcgtggcctcacccccgataaagtctttggtaaagaatccgat
agctttgctgatggtcagggatgtcagctttataaagcctatcaacagcgattattaagc
atcaacgcctgtgattttggtgatcttttgctccacatgttggttatcttcacccaacat
caagaggtgttgagcgattaccaagagcgtttccgctatattatggtcgatgaatatcag
gatactaatcaggcacaatatttatggcttcgcctactggcacaaaaaagacaaaatatc
tgttgcgtcggtgatgatgatcagtcgatctatagttggcgtggtgcagaagttgccaat
attttacgctttgaagaggatttcacaggggcaaaaatcatccgtcttgagcacaattat
cgctcgacaccgcatattttggccgctgcttctggtttaattgcccacaataacagccgt
ctagggaaaaccctgtggacagagcgtccccaaggcgaaaaagtaaaagtagtgggcgtg
tgggatggcccagaagaagccaaaaggctggtagccgatattcaaagcttacgccacagc
cagacaccccttaattctatggctattctgatacgggcccagttccaaacccgtgaattt
gaagatgtgtttgttgcgaagaatattccctatcgcattattggcggcttccgcttttat
gaacgcgcagaaatacgggatgctttggcctatctccgtgtcattgcacaaccgtctgat
gatctggcctttgaacggattatcaatgtgccccgtcgcggtatcggcaaaaaggcaatg
gaaaagctttattatcgcgccttctcggatcacattcctctgacggaagccgccgaaaag
ttggtatccgaaaatgcctttggtagcattgcaacacgcgccttgagtcagttgttgact
gattttagccaatggcgcgagggcttatccattattggtcatgccgatattacccgaaaa
atgctggatgaatccggttataaagcgatgttgagggccgatgccgatattcaatccgca
gggcggttggaaaatttagtcgagctggcacgcgctatggaggattacgacgatcttggc
agttttctagaacatgtcagcttggtgatggaacatgaaacagggccaatagacgacaaa
gttaccttgatgacgatgcatgcggccaaagggcttgaatatgatcatgtctttctggct
ggctgggaagaaggcgtatttccttcgcagcgttctttggatgaaggcggcttgcaaagc
ttggaggaagaacgacggcttgcctatgtcggaatcacacgggctaaaaaattctgcact
atttttcatgcggctaatcggcggatatatggtcagtggatgtcctcgtctccttcccgt
tttattacagaactacctgaacagcatatttcgcaaaaatccttgtcaaataaaaaaacg
tccccttcaagctggcgcgatgtctgggcggcagaccgtcacaaaaattcgccgacatca
atcccgcctgtttttacctctcgtaaaaaagatgaatcatcgccttggcaattagctagc
catcgaggcccaggatgggcgcgggcgcaaaaagtcgcccctgccccgctttcttctccc
cgacctattcggaaagaagccacagccatttatcatcgaggcgataaggttacccatcca
aaatttggacaaggtacgattgagaatatagaaagcgacaaacttactattcgtttccat
gatgaagaagctggtatcagaaagctgttaaaccgttttgtaacacccgcttaa
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